Detail information of GWHGAAZE018009


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007037627.10Reversibly glycosylated polypeptide 3 [Theobroma cacao]
Swissprottr|Q8RU27|UPTG2_SOLTU0Alpha-1,4-glucan-protein synthase [UDP-forming] 2
trEMBLtr|A0A061FYK1|A0A061FYK1_THECC0Reversibly glycosylated polypeptide 3 {ECO:0000313|EMBL:EOY22128.1}
TAIR10AT3G02230.10reversibly glycosylated polypeptide 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene1352011613522762+
GWHAAZE00000005mRNA1352011613522762+
GWHAAZE00000005exon1352011613520475+
GWHAAZE00000005exon1352148413521734+
GWHAAZE00000005exon1352182213521990+
GWHAAZE00000005exon1352241813522762+
GWHAAZE00000005CDS1352011613520475+
GWHAAZE00000005CDS1352148413521734+
GWHAAZE00000005CDS1352182213521990+
GWHAAZE00000005CDS1352241813522762+
Transcript Sequence

Network for GWHGAAZE018009

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03214.14RGP243585.80E-178
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K13379RGP, UTM Metabolic pathways map01100
Amino sugar and nucleotide sugar metabolismmap00520

Gene Ontology

GO term OntologyName
GO:0071669biological_processplant-type cell wall organization or biogenesis
GO:0016866molecular_functionintramolecular transferase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf162.354
SRR3591706second leaf76.765
SRR3591707mature leaf48.375
SRR3591708Shoot apex125.513
SRR3591709Stem81.817
SRR3591710White floral bud88.850
SRR3591711White flower157.395
SRR3591712Green floral bud129.952
SRR3591713Yellow flower170.106
SRP173429 SRR8316895Juvenile bud stage 68.099
SRR8316896Juvenile bud stage 77.205
SRR8316897Juvenile bud stage 38.005
SRR8316894Third green stage 36.605
SRR8316900Third green stage 119.780
SRR8316901Third green stage 109.721
SRR8316898Complete white stage 40.318
SRR8316899Complete white stage 127.055
SRR8316903Complete white stage 54.728
SRR8316902Silver flowering stage33.204
SRR8316904Silver flowering stage40.058
SRR8316905Silver flowering stage15.739
SRR8316906Gold flowering stage 117.909
SRR8316907Gold flowering stage 79.602
SRR8316908Gold flowering stage 137.466
SRP132670SRR6706286Control147.251
SRR6706287Light intensity 50%152.346
SRR6706288Light intensity 20%166.317
CNP0000432CNS0095592Slightly white alabastrum(diploid) 181.947
CNS0095593Slightly white alabastrum(diploid) 2110.865
CNS0095594Slightly white alabastrum(diploid) 366.662
CNS0095595Whole white alabastrum(diploid) 280.030
CNS0095596Whole white alabastrum(diploid) 369.830
CNS0095597Whole white alabastrum(diploid) 470.380
CNS0095598Silvery flower (diploied) 147.753
CNS0095599Silvery flower (diploied) 249.983
CNS0095600Silvery flower (diploied) 365.803
CNS0095601Golden flower (diploid) 137.065
CNS0095602Golden flower (diploid) 266.599
CNS0095603Golden flower (diploid) 369.138
CNS0095604Slightly white alabastrum(tetraploid) 174.517
CNS0095605Slightly white alabastrum(tetraploid) 259.252
CNS0095606Slightly white alabastrum(tetraploid) 3143.871
CNS0095607Whole white alabastrum(tetraploid) 140.935
CNS0095608Whole white alabastrum(tetraploid) 232.415
CNS0095609Whole white alabastrum(tetraploid) 396.958
CNS0095610Silvery flower (tetraploid) 133.458
CNS0095611Silvery flower (tetraploid) 222.223
CNS0095612Silvery flower (tetraploid) 331.407
CNS0095613Golden flower (tetraploid) 136.464
CNS0095614Golden flower (tetraploid) 255.958
CNS0095615Golden flower (tetraploid) 323.291
CRA001975CRR073297Stem 1124.719
CRR073298Stem 2122.829
CRR073299Stem 3130.449
CRR073300Leaf 1156.809
CRR073301Leaf 2177.854
CRR073302Leaf 3190.792
CRR073303Juvenile bud 1203.619
CRR073304Juvenile bud 2189.799
CRR073305Juvenile bud 3201.117
CRR073306Third green 136.072
CRR073307Third green 229.884
CRR073308Third green 345.687
CRR073309Second white 145.587
CRR073310Second white 233.374
CRR073311Second white 325.502
CRR073312Silver flowering 189.649
CRR073313Silver flowering 2126.661
CRR073314Silver flowering 397.750
CRR073315Gold flowering 153.181
CRR073316Gold flowering 271.645
CRR073317Gold flowering 384.772
CRR073318Tawny withering 1213.094
CRR073319Tawny withering 2179.769
CRR073320Tawny withering 3180.007