Detail information of GWHGAAZE017973


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002277287.10PREDICTED: probable serine/threonine-protein kinase WNK3 [Vitis vinifera]
Swissprottr|Q65X23|WNK2_ORYSJ0Probable serine/threonine-protein kinase WNK2
trEMBLtr|F6GTR4|F6GTR4_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB42930.1}
TAIR10AT3G48260.10with no lysine (K) kinase 3

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene1303647513041732-
GWHAAZE00000005mRNA1303647513041732-
GWHAAZE00000005exon1303647513036601-
GWHAAZE00000005exon1303671613037472-
GWHAAZE00000005exon1303756613037706-
GWHAAZE00000005exon1303801313038196-
GWHAAZE00000005exon1304042713040584-
GWHAAZE00000005exon1304067313040896-
GWHAAZE00000005exon1304110413041331-
GWHAAZE00000005exon1304144413041481-
GWHAAZE00000005exon1304164613041732-
GWHAAZE00000005CDS1304164613041732-
GWHAAZE00000005CDS1304144413041481-
GWHAAZE00000005CDS1304110413041331-
GWHAAZE00000005CDS1304067313040896-
GWHAAZE00000005CDS1304042713040584-
GWHAAZE00000005CDS1303801313038196-
GWHAAZE00000005CDS1303756613037706-
GWHAAZE00000005CDS1303671613037472-
GWHAAZE00000005CDS1303647513036601-
Transcript Sequence

Network for GWHGAAZE017973

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.26Pkinase312864.00E-50
PF12202.9OSR1_C3453996.00E-06
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyWNK_NRBP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding
GO:0004674molecular_functionprotein serine/threonine kinase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf14.258
SRR3591706second leaf10.700
SRR3591707mature leaf12.337
SRR3591708Shoot apex12.336
SRR3591709Stem22.668
SRR3591710White floral bud20.102
SRR3591711White flower30.317
SRR3591712Green floral bud14.625
SRR3591713Yellow flower40.260
SRP173429 SRR8316895Juvenile bud stage 8.086
SRR8316896Juvenile bud stage 9.165
SRR8316897Juvenile bud stage 4.482
SRR8316894Third green stage 4.327
SRR8316900Third green stage 8.321
SRR8316901Third green stage 8.424
SRR8316898Complete white stage 4.990
SRR8316899Complete white stage 14.801
SRR8316903Complete white stage 7.598
SRR8316902Silver flowering stage9.154
SRR8316904Silver flowering stage11.833
SRR8316905Silver flowering stage6.085
SRR8316906Gold flowering stage 18.632
SRR8316907Gold flowering stage 21.876
SRR8316908Gold flowering stage 27.637
SRP132670SRR6706286Control6.525
SRR6706287Light intensity 50%6.812
SRR6706288Light intensity 20%7.107
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.086
CNS0095593Slightly white alabastrum(diploid) 25.055
CNS0095594Slightly white alabastrum(diploid) 36.509
CNS0095595Whole white alabastrum(diploid) 24.949
CNS0095596Whole white alabastrum(diploid) 34.785
CNS0095597Whole white alabastrum(diploid) 45.343
CNS0095598Silvery flower (diploied) 111.947
CNS0095599Silvery flower (diploied) 27.537
CNS0095600Silvery flower (diploied) 324.275
CNS0095601Golden flower (diploid) 111.303
CNS0095602Golden flower (diploid) 225.811
CNS0095603Golden flower (diploid) 324.072
CNS0095604Slightly white alabastrum(tetraploid) 16.691
CNS0095605Slightly white alabastrum(tetraploid) 26.651
CNS0095606Slightly white alabastrum(tetraploid) 310.070
CNS0095607Whole white alabastrum(tetraploid) 14.076
CNS0095608Whole white alabastrum(tetraploid) 24.686
CNS0095609Whole white alabastrum(tetraploid) 36.921
CNS0095610Silvery flower (tetraploid) 137.208
CNS0095611Silvery flower (tetraploid) 236.658
CNS0095612Silvery flower (tetraploid) 333.477
CNS0095613Golden flower (tetraploid) 124.216
CNS0095614Golden flower (tetraploid) 237.375
CNS0095615Golden flower (tetraploid) 351.991
CRA001975CRR073297Stem 114.217
CRR073298Stem 211.080
CRR073299Stem 311.770
CRR073300Leaf 17.673
CRR073301Leaf 26.533
CRR073302Leaf 36.827
CRR073303Juvenile bud 16.812
CRR073304Juvenile bud 25.739
CRR073305Juvenile bud 37.519
CRR073306Third green 15.036
CRR073307Third green 26.607
CRR073308Third green 36.416
CRR073309Second white 15.380
CRR073310Second white 27.274
CRR073311Second white 36.808
CRR073312Silver flowering 15.039
CRR073313Silver flowering 27.503
CRR073314Silver flowering 37.354
CRR073315Gold flowering 17.004
CRR073316Gold flowering 27.675
CRR073317Gold flowering 33.152
CRR073318Tawny withering 112.909
CRR073319Tawny withering 26.673
CRR073320Tawny withering 310.331