Detail information of GWHGAAZE017924


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007036235.10Pantothenate kinase 2 isoform 2, partial [Theobroma cacao]
Swissprottr|Q8L5Y9|PANK2_ARATH0Pantothenate kinase 2
trEMBLtr|A0A061FU70|A0A061FU70_THECC0Pantothenate kinase 2 isoform 2 {ECO:0000313|EMBL:EOY20736.1} (Fragment)
TAIR10AT4G32180.32E-175pantothenate kinase 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene1250699312512228-
GWHAAZE00000005mRNA1250699312512228-
GWHAAZE00000005exon1251214712512228-
GWHAAZE00000005exon1251063912510851-
GWHAAZE00000005exon1251044912510504-
GWHAAZE00000005exon1250991312510029-
GWHAAZE00000005exon1250845712508576-
GWHAAZE00000005exon1250827112508365-
GWHAAZE00000005exon1250808412508177-
GWHAAZE00000005exon1250774412507875-
GWHAAZE00000005exon1250749212507604-
GWHAAZE00000005exon1250699312507260-
GWHAAZE00000005CDS1251214712512228-
GWHAAZE00000005CDS1251063912510851-
GWHAAZE00000005CDS1251044912510504-
GWHAAZE00000005CDS1250991312510029-
GWHAAZE00000005CDS1250845712508576-
GWHAAZE00000005CDS1250827112508365-
GWHAAZE00000005CDS1250808412508177-
GWHAAZE00000005CDS1250774412507875-
GWHAAZE00000005CDS1250749212507604-
GWHAAZE00000005CDS1250699312507260-
Transcript Sequence

Network for GWHGAAZE017924

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03630.15Fumble283643.00E-130
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K09680coaW Metabolic pathways map01100
Pantothenate and CoA biosynthesismap00770

Gene Ontology

GO term OntologyName
GO:0015937biological_processcoenzyme A biosynthetic process
GO:0004594molecular_functionpantothenate kinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf35.586
SRR3591706second leaf35.961
SRR3591707mature leaf24.805
SRR3591708Shoot apex31.195
SRR3591709Stem25.236
SRR3591710White floral bud46.675
SRR3591711White flower42.815
SRR3591712Green floral bud31.630
SRR3591713Yellow flower35.650
SRP173429 SRR8316895Juvenile bud stage 18.848
SRR8316896Juvenile bud stage 26.720
SRR8316897Juvenile bud stage 11.467
SRR8316894Third green stage 12.808
SRR8316900Third green stage 34.500
SRR8316901Third green stage 30.008
SRR8316898Complete white stage 9.853
SRR8316899Complete white stage 25.279
SRR8316903Complete white stage 28.759
SRR8316902Silver flowering stage12.545
SRR8316904Silver flowering stage25.668
SRR8316905Silver flowering stage12.880
SRR8316906Gold flowering stage 45.754
SRR8316907Gold flowering stage 39.468
SRR8316908Gold flowering stage 42.975
SRP132670SRR6706286Control40.101
SRR6706287Light intensity 50%41.890
SRR6706288Light intensity 20%44.430
CNP0000432CNS0095592Slightly white alabastrum(diploid) 110.298
CNS0095593Slightly white alabastrum(diploid) 28.996
CNS0095594Slightly white alabastrum(diploid) 312.442
CNS0095595Whole white alabastrum(diploid) 211.086
CNS0095596Whole white alabastrum(diploid) 37.158
CNS0095597Whole white alabastrum(diploid) 410.773
CNS0095598Silvery flower (diploied) 112.328
CNS0095599Silvery flower (diploied) 212.622
CNS0095600Silvery flower (diploied) 329.091
CNS0095601Golden flower (diploid) 19.779
CNS0095602Golden flower (diploid) 225.513
CNS0095603Golden flower (diploid) 325.970
CNS0095604Slightly white alabastrum(tetraploid) 114.518
CNS0095605Slightly white alabastrum(tetraploid) 210.349
CNS0095606Slightly white alabastrum(tetraploid) 340.053
CNS0095607Whole white alabastrum(tetraploid) 19.583
CNS0095608Whole white alabastrum(tetraploid) 27.765
CNS0095609Whole white alabastrum(tetraploid) 328.038
CNS0095610Silvery flower (tetraploid) 133.302
CNS0095611Silvery flower (tetraploid) 238.373
CNS0095612Silvery flower (tetraploid) 343.065
CNS0095613Golden flower (tetraploid) 112.883
CNS0095614Golden flower (tetraploid) 229.010
CNS0095615Golden flower (tetraploid) 327.812
CRA001975CRR073297Stem 118.901
CRR073298Stem 217.385
CRR073299Stem 312.673
CRR073300Leaf 120.907
CRR073301Leaf 214.848
CRR073302Leaf 315.511
CRR073303Juvenile bud 113.640
CRR073304Juvenile bud 213.183
CRR073305Juvenile bud 317.928
CRR073306Third green 115.830
CRR073307Third green 28.225
CRR073308Third green 316.188
CRR073309Second white 111.138
CRR073310Second white 211.995
CRR073311Second white 318.611
CRR073312Silver flowering 113.027
CRR073313Silver flowering 212.132
CRR073314Silver flowering 39.760
CRR073315Gold flowering 14.098
CRR073316Gold flowering 29.387
CRR073317Gold flowering 34.822
CRR073318Tawny withering 18.768
CRR073319Tawny withering 25.656
CRR073320Tawny withering 36.172