Detail information of GWHGAAZE017856


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011071722.10PREDICTED: calcium-dependent protein kinase 10-like [Sesamum indicum]
Swissprottr|Q9SSF8|CDPKU_ARATH0Calcium-dependent protein kinase 30
trEMBLtr|A0A068V2U5|A0A068V2U5_COFCA0Coffea canephora DH200=94 genomic scaffold, scaffold_92 {ECO:0000313|EMBL:CDP14887.1}
TAIR10AT1G18890.10calcium-dependent protein kinase 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene1173694511740575-
GWHAAZE00000005mRNA1173694511740575-
GWHAAZE00000005exon1173694511737118-
GWHAAZE00000005exon1173720711737437-
GWHAAZE00000005exon1173846611738633-
GWHAAZE00000005exon1173872211738837-
GWHAAZE00000005exon1173895611739108-
GWHAAZE00000005exon1173922411739367-
GWHAAZE00000005exon1173974811739792-
GWHAAZE00000005exon1173988511740575-
GWHAAZE00000005CDS1173988511740575-
GWHAAZE00000005CDS1173974811739792-
GWHAAZE00000005CDS1173922411739367-
GWHAAZE00000005CDS1173895611739108-
GWHAAZE00000005CDS1173872211738837-
GWHAAZE00000005CDS1173846611738633-
GWHAAZE00000005CDS1173720711737437-
GWHAAZE00000005CDS1173694511737118-
Transcript Sequence

Network for GWHGAAZE017856

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.26Pkinase763491.60E-71
PF13499.7EF-hand_73954561.30E-10
PF13499.7EF-hand_74675302.00E-13
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCAMK_CDPK

KEGG pathway

KO Enzyme pathway mapID
K13412CPK Plant-pathogen interaction map04626

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding
GO:0005509molecular_functioncalcium ion binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf48.258
SRR3591706second leaf11.037
SRR3591707mature leaf30.910
SRR3591708Shoot apex21.236
SRR3591709Stem52.769
SRR3591710White floral bud51.611
SRR3591711White flower52.730
SRR3591712Green floral bud24.720
SRR3591713Yellow flower55.714
SRP173429 SRR8316895Juvenile bud stage 13.955
SRR8316896Juvenile bud stage 22.220
SRR8316897Juvenile bud stage 10.167
SRR8316894Third green stage 5.166
SRR8316900Third green stage 15.212
SRR8316901Third green stage 18.768
SRR8316898Complete white stage 17.778
SRR8316899Complete white stage 31.834
SRR8316903Complete white stage 29.409
SRR8316902Silver flowering stage20.152
SRR8316904Silver flowering stage29.825
SRR8316905Silver flowering stage16.860
SRR8316906Gold flowering stage 53.088
SRR8316907Gold flowering stage 45.127
SRR8316908Gold flowering stage 61.692
SRP132670SRR6706286Control22.790
SRR6706287Light intensity 50%23.991
SRR6706288Light intensity 20%23.018
CNP0000432CNS0095592Slightly white alabastrum(diploid) 110.717
CNS0095593Slightly white alabastrum(diploid) 211.484
CNS0095594Slightly white alabastrum(diploid) 312.670
CNS0095595Whole white alabastrum(diploid) 29.341
CNS0095596Whole white alabastrum(diploid) 37.441
CNS0095597Whole white alabastrum(diploid) 49.360
CNS0095598Silvery flower (diploied) 123.208
CNS0095599Silvery flower (diploied) 221.703
CNS0095600Silvery flower (diploied) 348.966
CNS0095601Golden flower (diploid) 125.869
CNS0095602Golden flower (diploid) 257.990
CNS0095603Golden flower (diploid) 354.483
CNS0095604Slightly white alabastrum(tetraploid) 17.110
CNS0095605Slightly white alabastrum(tetraploid) 24.019
CNS0095606Slightly white alabastrum(tetraploid) 316.333
CNS0095607Whole white alabastrum(tetraploid) 14.729
CNS0095608Whole white alabastrum(tetraploid) 23.955
CNS0095609Whole white alabastrum(tetraploid) 311.993
CNS0095610Silvery flower (tetraploid) 143.371
CNS0095611Silvery flower (tetraploid) 240.352
CNS0095612Silvery flower (tetraploid) 371.195
CNS0095613Golden flower (tetraploid) 133.226
CNS0095614Golden flower (tetraploid) 242.343
CNS0095615Golden flower (tetraploid) 381.719
CRA001975CRR073297Stem 132.188
CRR073298Stem 232.589
CRR073299Stem 331.146
CRR073300Leaf 135.482
CRR073301Leaf 231.423
CRR073302Leaf 325.056
CRR073303Juvenile bud 127.469
CRR073304Juvenile bud 229.649
CRR073305Juvenile bud 341.460
CRR073306Third green 156.955
CRR073307Third green 253.941
CRR073308Third green 355.146
CRR073309Second white 138.153
CRR073310Second white 236.763
CRR073311Second white 340.178
CRR073312Silver flowering 158.664
CRR073313Silver flowering 269.569
CRR073314Silver flowering 357.034
CRR073315Gold flowering 121.036
CRR073316Gold flowering 228.543
CRR073317Gold flowering 319.742
CRR073318Tawny withering 171.123
CRR073319Tawny withering 244.884
CRR073320Tawny withering 379.858