Detail information of GWHGAAZE017854


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_008239652.10PREDICTED: ATPase 11, plasma membrane-type [Prunus mume]
Swissprottr|P22180|PMA1_SOLLC0Plasma membrane ATPase 1
trEMBLtr|A0A067KG17|A0A067KG17_JATCU0Uncharacterized protein {ECO:0000313|EMBL:KDP31195.1}
TAIR10AT3G47950.10H(+)-ATPase 4

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene1169484111701527-
GWHAAZE00000005mRNA1169484111701527-
GWHAAZE00000005exon1169484111694937-
GWHAAZE00000005exon1169505811695236-
GWHAAZE00000005exon1169532311695505-
GWHAAZE00000005exon1169559811695783-
GWHAAZE00000005exon1169617611696336-
GWHAAZE00000005exon1169642611696507-
GWHAAZE00000005exon1169665511696687-
GWHAAZE00000005exon1169687211697110-
GWHAAZE00000005exon1169721311697377-
GWHAAZE00000005exon1169797211698116-
GWHAAZE00000005exon1169822111698325-
GWHAAZE00000005exon1169841711698539-
GWHAAZE00000005exon1169864111698760-
GWHAAZE00000005exon1169883911698958-
GWHAAZE00000005exon1169904411699250-
GWHAAZE00000005exon1169951711699678-
GWHAAZE00000005exon1169978211699916-
GWHAAZE00000005exon1170025911700396-
GWHAAZE00000005exon1170049311700591-
GWHAAZE00000005exon1170087911700998-
GWHAAZE00000005exon1170108411701118-
GWHAAZE00000005exon1170151211701527-
GWHAAZE00000005CDS1170151211701527-
GWHAAZE00000005CDS1170108411701118-
GWHAAZE00000005CDS1170087911700998-
GWHAAZE00000005CDS1170049311700591-
GWHAAZE00000005CDS1170025911700396-
GWHAAZE00000005CDS1169978211699916-
GWHAAZE00000005CDS1169951711699678-
GWHAAZE00000005CDS1169904411699250-
GWHAAZE00000005CDS1169883911698958-
GWHAAZE00000005CDS1169864111698760-
GWHAAZE00000005CDS1169841711698539-
GWHAAZE00000005CDS1169822111698325-
GWHAAZE00000005CDS1169797211698116-
GWHAAZE00000005CDS1169721311697377-
GWHAAZE00000005CDS1169687211697110-
GWHAAZE00000005CDS1169665511696687-
GWHAAZE00000005CDS1169642611696507-
GWHAAZE00000005CDS1169617611696336-
GWHAAZE00000005CDS1169559811695783-
GWHAAZE00000005CDS1169532311695505-
GWHAAZE00000005CDS1169505811695236-
GWHAAZE00000005CDS1169484111694937-
Transcript Sequence

Network for GWHGAAZE017854

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00690.27Cation_ATPase_N19823.50E-14
PF00122.21E1-E2_ATPase1313044.60E-44
PF00702.27Hydrolase3205973.70E-17
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01535PMA1, PMA2 Metabolic pathways map01100
Oxidative phosphorylationmap00190

Gene Ontology

GO term OntologyName
GO:0120029biological_processproton export across plasma membrane
GO:0016021cellular_componentintegral component of membrane
GO:0008553molecular_functionproton-exporting ATPase activity, phosphorylative mechanism
GO:0000166molecular_functionnucleotide binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf262.398
SRR3591706second leaf182.073
SRR3591707mature leaf135.890
SRR3591708Shoot apex198.097
SRR3591709Stem161.204
SRR3591710White floral bud583.299
SRR3591711White flower547.681
SRR3591712Green floral bud275.177
SRR3591713Yellow flower281.343
SRP173429 SRR8316895Juvenile bud stage 141.495
SRR8316896Juvenile bud stage 184.528
SRR8316897Juvenile bud stage 103.136
SRR8316894Third green stage 106.722
SRR8316900Third green stage 331.845
SRR8316901Third green stage 294.382
SRR8316898Complete white stage 281.341
SRR8316899Complete white stage 362.865
SRR8316903Complete white stage 557.418
SRR8316902Silver flowering stage282.994
SRR8316904Silver flowering stage456.150
SRR8316905Silver flowering stage213.495
SRR8316906Gold flowering stage 550.651
SRR8316907Gold flowering stage 551.918
SRR8316908Gold flowering stage 565.971
SRP132670SRR6706286Control381.582
SRR6706287Light intensity 50%399.632
SRR6706288Light intensity 20%418.647
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1100.505
CNS0095593Slightly white alabastrum(diploid) 2134.780
CNS0095594Slightly white alabastrum(diploid) 396.933
CNS0095595Whole white alabastrum(diploid) 2117.550
CNS0095596Whole white alabastrum(diploid) 3118.408
CNS0095597Whole white alabastrum(diploid) 498.877
CNS0095598Silvery flower (diploied) 1168.480
CNS0095599Silvery flower (diploied) 2171.028
CNS0095600Silvery flower (diploied) 3516.822
CNS0095601Golden flower (diploid) 1119.153
CNS0095602Golden flower (diploid) 2349.557
CNS0095603Golden flower (diploid) 3338.795
CNS0095604Slightly white alabastrum(tetraploid) 1134.279
CNS0095605Slightly white alabastrum(tetraploid) 2107.452
CNS0095606Slightly white alabastrum(tetraploid) 3369.095
CNS0095607Whole white alabastrum(tetraploid) 174.527
CNS0095608Whole white alabastrum(tetraploid) 258.888
CNS0095609Whole white alabastrum(tetraploid) 3251.422
CNS0095610Silvery flower (tetraploid) 1429.874
CNS0095611Silvery flower (tetraploid) 2317.042
CNS0095612Silvery flower (tetraploid) 3607.892
CNS0095613Golden flower (tetraploid) 1161.038
CNS0095614Golden flower (tetraploid) 2252.510
CNS0095615Golden flower (tetraploid) 3427.759
CRA001975CRR073297Stem 1312.669
CRR073298Stem 2297.224
CRR073299Stem 3247.653
CRR073300Leaf 1425.574
CRR073301Leaf 2384.271
CRR073302Leaf 3348.119
CRR073303Juvenile bud 1345.866
CRR073304Juvenile bud 2337.677
CRR073305Juvenile bud 3486.466
CRR073306Third green 1647.090
CRR073307Third green 2409.508
CRR073308Third green 3542.653
CRR073309Second white 1493.490
CRR073310Second white 2432.704
CRR073311Second white 3505.329
CRR073312Silver flowering 1463.353
CRR073313Silver flowering 2552.378
CRR073314Silver flowering 3469.615
CRR073315Gold flowering 175.587
CRR073316Gold flowering 2116.374
CRR073317Gold flowering 397.275
CRR073318Tawny withering 1155.952
CRR073319Tawny withering 2112.671
CRR073320Tawny withering 3144.005