Detail information of GWHGAAZE017725


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002526282.13.7739E-126phosphopentothenoylcysteine decarboxylase, putative [Ricinus communis]
Swissprottr|Q9SWE5|HAL3A_ARATH9E-119Phosphopantothenoylcysteine decarboxylase
trEMBLtr|B9SJW3|B9SJW3_RICCO1E-126Phosphopentothenoylcysteine decarboxylase, putative {ECO:0000313|EMBL:EEF36071.1}
TAIR10AT3G18030.15E-94HAL3-like protein A

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene1008309210084780-
GWHAAZE00000005mRNA1008309210084780-
GWHAAZE00000005exon1008309210083373-
GWHAAZE00000005exon1008444210084780-
GWHAAZE00000005CDS1008444210084780-
GWHAAZE00000005CDS1008309210083373-
Transcript Sequence

Network for GWHGAAZE017725

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02441.20Flavoprotein221951.30E-44
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K01598PPCDC, coaC Metabolic pathways map01100
Pantothenate and CoA biosynthesismap00770

Gene Ontology

GO term OntologyName
GO:0003824molecular_functioncatalytic activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf36.432
SRR3591706second leaf39.663
SRR3591707mature leaf26.276
SRR3591708Shoot apex44.922
SRR3591709Stem37.191
SRR3591710White floral bud34.997
SRR3591711White flower40.017
SRR3591712Green floral bud37.426
SRR3591713Yellow flower32.095
SRP173429 SRR8316895Juvenile bud stage 30.561
SRR8316896Juvenile bud stage 51.086
SRR8316897Juvenile bud stage 21.286
SRR8316894Third green stage 17.354
SRR8316900Third green stage 51.010
SRR8316901Third green stage 51.612
SRR8316898Complete white stage 21.821
SRR8316899Complete white stage 54.826
SRR8316903Complete white stage 29.802
SRR8316902Silver flowering stage22.727
SRR8316904Silver flowering stage26.296
SRR8316905Silver flowering stage16.510
SRR8316906Gold flowering stage 39.950
SRR8316907Gold flowering stage 42.503
SRR8316908Gold flowering stage 42.281
SRP132670SRR6706286Control27.712
SRR6706287Light intensity 50%32.312
SRR6706288Light intensity 20%36.313
CNP0000432CNS0095592Slightly white alabastrum(diploid) 149.979
CNS0095593Slightly white alabastrum(diploid) 253.250
CNS0095594Slightly white alabastrum(diploid) 340.799
CNS0095595Whole white alabastrum(diploid) 240.460
CNS0095596Whole white alabastrum(diploid) 345.371
CNS0095597Whole white alabastrum(diploid) 435.935
CNS0095598Silvery flower (diploied) 142.192
CNS0095599Silvery flower (diploied) 230.541
CNS0095600Silvery flower (diploied) 335.334
CNS0095601Golden flower (diploid) 132.524
CNS0095602Golden flower (diploid) 230.930
CNS0095603Golden flower (diploid) 334.753
CNS0095604Slightly white alabastrum(tetraploid) 144.421
CNS0095605Slightly white alabastrum(tetraploid) 242.825
CNS0095606Slightly white alabastrum(tetraploid) 362.797
CNS0095607Whole white alabastrum(tetraploid) 132.877
CNS0095608Whole white alabastrum(tetraploid) 229.059
CNS0095609Whole white alabastrum(tetraploid) 342.020
CNS0095610Silvery flower (tetraploid) 135.577
CNS0095611Silvery flower (tetraploid) 235.126
CNS0095612Silvery flower (tetraploid) 334.722
CNS0095613Golden flower (tetraploid) 136.886
CNS0095614Golden flower (tetraploid) 232.290
CNS0095615Golden flower (tetraploid) 344.415
CRA001975CRR073297Stem 143.408
CRR073298Stem 244.451
CRR073299Stem 348.370
CRR073300Leaf 145.307
CRR073301Leaf 246.207
CRR073302Leaf 343.385
CRR073303Juvenile bud 154.561
CRR073304Juvenile bud 234.589
CRR073305Juvenile bud 356.974
CRR073306Third green 138.704
CRR073307Third green 238.117
CRR073308Third green 334.026
CRR073309Second white 141.600
CRR073310Second white 229.657
CRR073311Second white 332.660
CRR073312Silver flowering 131.525
CRR073313Silver flowering 237.433
CRR073314Silver flowering 324.262
CRR073315Gold flowering 125.711
CRR073316Gold flowering 224.192
CRR073317Gold flowering 325.442
CRR073318Tawny withering 136.811
CRR073319Tawny withering 240.794
CRR073320Tawny withering 353.208