Detail information of GWHGAAZE017721


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP30976.11.25459E-93hypothetical protein JCGZ_11352 [Jatropha curcas]
trEMBLtr|A0A067K421|A0A067K421_JATCU5E-94Uncharacterized protein {ECO:0000313|EMBL:KDP30976.1}
TAIR10AT5G63280.12E-66C2H2-like zinc finger protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene1003294210034307-
GWHAAZE00000005mRNA1003294210034307-
GWHAAZE00000005exon1003294210033013-
GWHAAZE00000005exon1003309210033214-
GWHAAZE00000005exon1003391610034125-
GWHAAZE00000005exon1003421210034307-
GWHAAZE00000005CDS1003421210034307-
GWHAAZE00000005CDS1003391610034125-
GWHAAZE00000005CDS1003309210033214-
GWHAAZE00000005CDS1003294210033013-
Transcript Sequence

Network for GWHGAAZE017721

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676molecular_functionnucleic acid binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf29.342
SRR3591706second leaf15.344
SRR3591707mature leaf16.380
SRR3591708Shoot apex24.637
SRR3591709Stem30.488
SRR3591710White floral bud40.333
SRR3591711White flower46.159
SRR3591712Green floral bud43.592
SRR3591713Yellow flower42.744
SRP173429 SRR8316895Juvenile bud stage 19.237
SRR8316896Juvenile bud stage 30.769
SRR8316897Juvenile bud stage 12.445
SRR8316894Third green stage 15.729
SRR8316900Third green stage 63.923
SRR8316901Third green stage 53.956
SRR8316898Complete white stage 32.950
SRR8316899Complete white stage 41.872
SRR8316903Complete white stage 36.124
SRR8316902Silver flowering stage32.950
SRR8316904Silver flowering stage54.785
SRR8316905Silver flowering stage22.437
SRR8316906Gold flowering stage 71.321
SRR8316907Gold flowering stage 61.724
SRR8316908Gold flowering stage 77.038
SRP132670SRR6706286Control19.627
SRR6706287Light intensity 50%15.957
SRR6706288Light intensity 20%18.524
CNP0000432CNS0095592Slightly white alabastrum(diploid) 136.397
CNS0095593Slightly white alabastrum(diploid) 231.451
CNS0095594Slightly white alabastrum(diploid) 326.509
CNS0095595Whole white alabastrum(diploid) 262.316
CNS0095596Whole white alabastrum(diploid) 370.874
CNS0095597Whole white alabastrum(diploid) 465.757
CNS0095598Silvery flower (diploied) 127.518
CNS0095599Silvery flower (diploied) 224.346
CNS0095600Silvery flower (diploied) 352.671
CNS0095601Golden flower (diploid) 127.120
CNS0095602Golden flower (diploid) 244.694
CNS0095603Golden flower (diploid) 340.808
CNS0095604Slightly white alabastrum(tetraploid) 158.473
CNS0095605Slightly white alabastrum(tetraploid) 249.428
CNS0095606Slightly white alabastrum(tetraploid) 328.056
CNS0095607Whole white alabastrum(tetraploid) 184.540
CNS0095608Whole white alabastrum(tetraploid) 293.814
CNS0095609Whole white alabastrum(tetraploid) 361.131
CNS0095610Silvery flower (tetraploid) 155.753
CNS0095611Silvery flower (tetraploid) 254.114
CNS0095612Silvery flower (tetraploid) 358.760
CNS0095613Golden flower (tetraploid) 138.034
CNS0095614Golden flower (tetraploid) 253.512
CNS0095615Golden flower (tetraploid) 349.565
CRA001975CRR073297Stem 113.723
CRR073298Stem 215.704
CRR073299Stem 312.815
CRR073300Leaf 122.013
CRR073301Leaf 221.930
CRR073302Leaf 316.958
CRR073303Juvenile bud 121.986
CRR073304Juvenile bud 220.185
CRR073305Juvenile bud 312.108
CRR073306Third green 119.454
CRR073307Third green 216.016
CRR073308Third green 314.567
CRR073309Second white 121.419
CRR073310Second white 226.561
CRR073311Second white 316.953
CRR073312Silver flowering 120.335
CRR073313Silver flowering 217.347
CRR073314Silver flowering 317.728
CRR073315Gold flowering 16.262
CRR073316Gold flowering 28.628
CRR073317Gold flowering 35.261
CRR073318Tawny withering 121.465
CRR073319Tawny withering 215.642
CRR073320Tawny withering 315.513