Gene detail

Detail information of GWHGAAZE017697

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_010102882.1	5.6508E-155	Adenylate kinase B [Morus notabilis]
Swissprot	tr\|Q08480\|KAD4_ORYSJ	1E-156	Adenylate kinase 4
trEMBL	tr\|W9RSI3\|W9RSI3_9ROSA	2E-155	Adenylate kinase B {ECO:0000313\|EMBL:EXB94319.1}
TAIR10	AT5G63400.1	1E-114	adenylate kinase 1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000005	gene	9744210	9750583	-
GWHAAZE00000005	mRNA	9744210	9750583	-
GWHAAZE00000005	exon	9744210	9744513	-
GWHAAZE00000005	exon	9745107	9745196	-
GWHAAZE00000005	exon	9746103	9746270	-
GWHAAZE00000005	exon	9746393	9746512	-
GWHAAZE00000005	exon	9746598	9746743	-
GWHAAZE00000005	exon	9750520	9750583	-
GWHAAZE00000005	CDS	9750520	9750583	-
GWHAAZE00000005	CDS	9746598	9746743	-
GWHAAZE00000005	CDS	9746393	9746512	-
GWHAAZE00000005	CDS	9746103	9746270	-
GWHAAZE00000005	CDS	9745107	9745196	-
GWHAAZE00000005	CDS	9744412	9744513	-
GWHAAZE00000005	three_prime_UTR	9744210	9744411	-

Transcript Sequence
>GWHTAAZE017717 ATGACGGAACTTCTTCGCCGCATGAAGTGCTCCACTAAACCTGACAAACGCCTAATTCTTGTAGGTCCCCCTGGATCAGGGAAAGGTACGCAGTCACCAATTATTAAGGACGAATACTGCTTGTGCCATTTGGCTACTGGTGATATGCTTAGAGCGGCTGTTGCTGCTAAAACACCTCTTGGTATTAAAGCTAAGGAGGCTATGGATAAGGGCGAACTTGTTTCCGACGACTTGGTTGTTGGAATAATAGACGAAGCATTGAAGAAGCCTTCTTGTCAAAAAGGATTCATTCTTGATGGGTTTCCGAGGACTGTAACCCAAGCGGAAAAGCTGGATGAGATGCTTGAGAAGAGAGGGGTTAAAGTTGATAAGGTGCTCAACTTTGCTATCGATGATGCGATCTTGGAGGAGAGGATTACTGGTCGTTGGATCCACCCTGCTAGTGGTCGGACCTACCACACCAAATTTGCGCCTCCTAAAGTTCCAGGAATTGATAATGTCACTGGAGAACCTTTGATTCAACGTAAAGATGACACTGCAGCCGTTCTCAAGTCAAGATTGGAGGCTTTTCATCGGCAGACTGAACCGGTTATTGATTATTACCAGAAGAAGAGTATTGTTGCAAATCTCCATGCCGAAAAACCCCCGGAGGAGGTGAAGGCTGAGGTTCAGAAGGCGCTCTCGTCGTGAATTGAGCCACTTTTTTTCGACATAAAAAGTCTGAACTATATTAAAACAATTCTTGTTTTTTTTTTCAGGTCTTCCCATCACATTGTATTAATTAAGATTATAAGATTGAATCACTGACCCACAGGCTTCCCTTTAGTTGCTTCTGCTTAAATGTAAGCTCCAGCTGGTTAGTTGTTGAGGGGTATTAACCAAGTGTATTTTT

Network for GWHGAAZE017697

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00406.23	ADK	20	205	5.20E-60
PF05191.15	ADK_lid	142	177	1.30E-16

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K00939	adk, AK	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Purine metabolism	map00230
		Thiamine metabolism	map00730

Gene Ontology

GO term	Ontology	Name
GO:0006139	biological_process	nucleobase-containing compound metabolic process
GO:0005524	molecular_function	ATP binding
GO:0019205	molecular_function	nucleobase-containing compound kinase activity
GO:0004017	molecular_function	adenylate kinase activity
GO:0016776	molecular_function	phosphotransferase activity, phosphate group as acceptor

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	51.128
	SRR3591706	second leaf	22.517
	SRR3591707	mature leaf	11.887
	SRR3591708	Shoot apex	53.362
	SRR3591709	Stem	39.636
	SRR3591710	White floral bud	37.014
	SRR3591711	White flower	51.533
	SRR3591712	Green floral bud	43.215
	SRR3591713	Yellow flower	34.360
SRP173429	SRR8316895	Juvenile bud stage	27.133
	SRR8316896	Juvenile bud stage	38.063
	SRR8316897	Juvenile bud stage	20.822
	SRR8316894	Third green stage	16.716
	SRR8316900	Third green stage	43.866
	SRR8316901	Third green stage	45.563
	SRR8316898	Complete white stage	16.725
	SRR8316899	Complete white stage	43.003
	SRR8316903	Complete white stage	26.647
	SRR8316902	Silver flowering stage	21.683
	SRR8316904	Silver flowering stage	22.550
	SRR8316905	Silver flowering stage	9.875
	SRR8316906	Gold flowering stage	36.406
	SRR8316907	Gold flowering stage	38.877
	SRR8316908	Gold flowering stage	36.251
SRP132670	SRR6706286	Control	37.769
	SRR6706287	Light intensity 50%	40.281
	SRR6706288	Light intensity 20%	47.085
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	45.520
	CNS0095593	Slightly white alabastrum(diploid) 2	43.575
	CNS0095594	Slightly white alabastrum(diploid) 3	43.239
	CNS0095595	Whole white alabastrum(diploid) 2	31.572
	CNS0095596	Whole white alabastrum(diploid) 3	29.714
	CNS0095597	Whole white alabastrum(diploid) 4	33.655
	CNS0095598	Silvery flower (diploied) 1	31.030
	CNS0095599	Silvery flower (diploied) 2	32.629
	CNS0095600	Silvery flower (diploied) 3	37.911
	CNS0095601	Golden flower (diploid) 1	26.149
	CNS0095602	Golden flower (diploid) 2	29.119
	CNS0095603	Golden flower (diploid) 3	27.598
	CNS0095604	Slightly white alabastrum(tetraploid) 1	42.536
	CNS0095605	Slightly white alabastrum(tetraploid) 2	42.049
	CNS0095606	Slightly white alabastrum(tetraploid) 3	50.745
	CNS0095607	Whole white alabastrum(tetraploid) 1	35.970
	CNS0095608	Whole white alabastrum(tetraploid) 2	30.104
	CNS0095609	Whole white alabastrum(tetraploid) 3	38.320
	CNS0095610	Silvery flower (tetraploid) 1	43.895
	CNS0095611	Silvery flower (tetraploid) 2	29.974
	CNS0095612	Silvery flower (tetraploid) 3	32.247
	CNS0095613	Golden flower (tetraploid) 1	27.252
	CNS0095614	Golden flower (tetraploid) 2	32.087
	CNS0095615	Golden flower (tetraploid) 3	22.294
CRA001975	CRR073297	Stem 1	42.647
	CRR073298	Stem 2	43.082
	CRR073299	Stem 3	43.829
	CRR073300	Leaf 1	42.980
	CRR073301	Leaf 2	43.681
	CRR073302	Leaf 3	44.510
	CRR073303	Juvenile bud 1	41.968
	CRR073304	Juvenile bud 2	35.589
	CRR073305	Juvenile bud 3	40.256
	CRR073306	Third green 1	23.471
	CRR073307	Third green 2	29.676
	CRR073308	Third green 3	29.953
	CRR073309	Second white 1	32.243
	CRR073310	Second white 2	26.314
	CRR073311	Second white 3	26.959
	CRR073312	Silver flowering 1	26.649
	CRR073313	Silver flowering 2	26.751
	CRR073314	Silver flowering 3	21.690
	CRR073315	Gold flowering 1	22.873
	CRR073316	Gold flowering 2	20.475
	CRR073317	Gold flowering 3	15.622
	CRR073318	Tawny withering 1	63.383
	CRR073319	Tawny withering 2	61.857
	CRR073320	Tawny withering 3	61.170