Gene detail

Detail information of GWHGAAZE017694

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	KDP26756.1	0	hypothetical protein JCGZ_17914 [Jatropha curcas]
Swissprot	tr\|Q7XUF4\|CDKG2_ORYSJ	0	Cyclin-dependent kinase G-2
trEMBL	tr\|A0A067JS44\|A0A067JS44_JATCU	0	Uncharacterized protein {ECO:0000313\|EMBL:KDP26756.1}
TAIR10	AT1G67580.2	2E-160	Protein kinase superfamily protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000005	gene	9711239	9720470	+
GWHAAZE00000005	mRNA	9711239	9720470	+
GWHAAZE00000005	exon	9711239	9711255	+
GWHAAZE00000005	exon	9716256	9717611	+
GWHAAZE00000005	exon	9719147	9719282	+
GWHAAZE00000005	exon	9719374	9719462	+
GWHAAZE00000005	exon	9719602	9719713	+
GWHAAZE00000005	exon	9720126	9720234	+
GWHAAZE00000005	exon	9720448	9720470	+
GWHAAZE00000005	CDS	9711239	9711255	+
GWHAAZE00000005	CDS	9716256	9717611	+
GWHAAZE00000005	CDS	9719147	9719282	+
GWHAAZE00000005	CDS	9719374	9719462	+
GWHAAZE00000005	CDS	9719602	9719713	+
GWHAAZE00000005	CDS	9720126	9720234	+
GWHAAZE00000005	CDS	9720448	9720470	+

Transcript Sequence
>GWHTAAZE017714 ATGGTGGTGTTCTTTTTGATTTTTGGTGGTGGGCATGATGGTCATAGGCAAAGGGAGGGATTTGTTGATGGATATGGCAACAAAGAGCATGGGGACTTGCATGCTGCAACAGATTCTACCGAGGTTGCTGATCCTCAGTCCCAGGCTCAGGTTAGCAGAATTACGAAGTTTGGGGATGCTACACAGATTCCTTCACCTAAGAAGAAAAGGAAATTTTTGCCTATTCTGTGGGATAGAGATGATAAGGAGGTGAGAATTTCTTCTAAGATCAGGATTGTTCGAAGAAGCTCTCCTTGTTCTTTACTATCTGTACCCGTATCAGATTTACAATTACCAAGTAGAAGATGCCATGTTACTCCTTGTTCTCCTGAGAACCATGTGACCAATGGTTCATTTGAGGCTGGCATAGCGGAGTCTTTGACAGATTTGATTGCTCCAGTTTCTGCAGAGCCTTACAGCAATAATGACCATGACCATGAACTGGAAAATTTGGAAGAGGAAGAGTACATTGTGGAACGAAACATATCTACATCAAAATGGGCTGATGTGGATTCATCAAAAACATTACCATGCACCAGCAGTTCGAGTCCTGAGAGTGGGGAGTTTTGGAGAGAAGGCTTTGAAAAAACCAAGAAAAAGTCTGGATCTGCTAAAGCAGCTTGTTTTGCGGGGCCGTCCAGTGAAGATGAACATTCAGTGAATGGGTTGGAAGATGATGACATTATGAAGATTGATGAGAACTGTCATGATGTTGCAGGTGTTAGTAATTTGGACTCAGATGCTGAGGATGACGATGATTGTAGTAGGATCCAAGTGTCTACTTTCCCCAAACATAGAAGGATAAACATGCTTCAAGGTTGTAGAAGTGTGTTTGAATACGAGAAACTCAACAAGATAAATGAAGGCACATATGGTGTTGTGTTTAAAGCGATGGATAAGGAGACCAGAGAGATTGTGGCGTTAAAGAAGGTAAAGATGGCAGCAGAAACGGAGGGTTTCCCTGTGATGTCTTTGAGGGAAATAAACATTCTTATGTCTCTCCAACACCCAGCTATTGTGGAGGTTAAAGAAGTAGTTACGGATGATCTTGATGGAGTTTTCATGGTCATGGAGTACATGGAACACGACCTCAAAGGGCTTTTGGAGGCAATGAAGCAGCCTTTTAGTCAGAGCGAAGTTAAATGCTTGATGCTACAACTATTGGAGGGTGTCAAGTCTCTTCATGATAATTGGGTGCTTCATAGGGATTTGAAGACATCAAATATTCTTTTGAATAACAGGGGTGAACTGAAAATCTGCGACTTTGGAATGTCTCGGCAGTATGGGAGCCCATTGAAACCGTATACTCCTTTGGTGGTCACTTTGTGGTACAGGGCTCCTGAAATTCTGCTAGGAGCAGAACATTATTCGACAGCAATTGACATGTGGTCAGTGGGTTGCATAATGGCAGAACTATTGGCCAAGGAACCATTGTTTAATGGGAGAACTGAACTTGAACAGCTCGACAAGATTTTCAGAACTCTTGGTACGCCTAGTGAGATGATTTGGCCAGGCTTTTCCAACCTGCCAGGAGCCAAAGTTTGTTGCGTTAAACAGCCTTATAACATGTTGCGTAAGAAATTTCCTGCTGCAACTTTCACGGGATCTCCTGCTCTTACGGAGCTGGGTTTTGATTTGTTGAACAAGCTTTTAACTTATGATCCCAATAAGAGAATAACTGCAGAGGATGCTCTCAATCATGGCTGGTTTCAGGAAGTCCCTCTTCCCAAATCTAAAGACTTCATGCCCACATTTCCTGCTCAACGTTTGAAGCCTAATTGCCAGTGGCCTCGTGATAAATGA

Network for GWHGAAZE017694

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.26	Pkinase	293	583	7.80E-72

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	CMGC_CDK-PITSLRE

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	14.660
	SRR3591706	second leaf	11.894
	SRR3591707	mature leaf	16.133
	SRR3591708	Shoot apex	17.354
	SRR3591709	Stem	22.195
	SRR3591710	White floral bud	24.230
	SRR3591711	White flower	24.372
	SRR3591712	Green floral bud	16.691
	SRR3591713	Yellow flower	24.661
SRP173429	SRR8316895	Juvenile bud stage	6.530
	SRR8316896	Juvenile bud stage	9.603
	SRR8316897	Juvenile bud stage	5.390
	SRR8316894	Third green stage	4.286
	SRR8316900	Third green stage	12.017
	SRR8316901	Third green stage	11.025
	SRR8316898	Complete white stage	6.393
	SRR8316899	Complete white stage	17.947
	SRR8316903	Complete white stage	12.628
	SRR8316902	Silver flowering stage	7.795
	SRR8316904	Silver flowering stage	10.095
	SRR8316905	Silver flowering stage	3.998
	SRR8316906	Gold flowering stage	16.462
	SRR8316907	Gold flowering stage	14.687
	SRR8316908	Gold flowering stage	16.001
SRP132670	SRR6706286	Control	8.084
	SRR6706287	Light intensity 50%	7.906
	SRR6706288	Light intensity 20%	8.181
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	10.545
	CNS0095593	Slightly white alabastrum(diploid) 2	9.157
	CNS0095594	Slightly white alabastrum(diploid) 3	8.586
	CNS0095595	Whole white alabastrum(diploid) 2	9.173
	CNS0095596	Whole white alabastrum(diploid) 3	8.714
	CNS0095597	Whole white alabastrum(diploid) 4	8.206
	CNS0095598	Silvery flower (diploied) 1	11.702
	CNS0095599	Silvery flower (diploied) 2	10.487
	CNS0095600	Silvery flower (diploied) 3	13.025
	CNS0095601	Golden flower (diploid) 1	12.577
	CNS0095602	Golden flower (diploid) 2	14.278
	CNS0095603	Golden flower (diploid) 3	13.621
	CNS0095604	Slightly white alabastrum(tetraploid) 1	13.396
	CNS0095605	Slightly white alabastrum(tetraploid) 2	11.292
	CNS0095606	Slightly white alabastrum(tetraploid) 3	19.873
	CNS0095607	Whole white alabastrum(tetraploid) 1	8.927
	CNS0095608	Whole white alabastrum(tetraploid) 2	7.028
	CNS0095609	Whole white alabastrum(tetraploid) 3	11.981
	CNS0095610	Silvery flower (tetraploid) 1	17.459
	CNS0095611	Silvery flower (tetraploid) 2	17.806
	CNS0095612	Silvery flower (tetraploid) 3	19.196
	CNS0095613	Golden flower (tetraploid) 1	17.477
	CNS0095614	Golden flower (tetraploid) 2	16.917
	CNS0095615	Golden flower (tetraploid) 3	20.178
CRA001975	CRR073297	Stem 1	13.237
	CRR073298	Stem 2	10.539
	CRR073299	Stem 3	8.447
	CRR073300	Leaf 1	14.215
	CRR073301	Leaf 2	9.566
	CRR073302	Leaf 3	6.591
	CRR073303	Juvenile bud 1	6.795
	CRR073304	Juvenile bud 2	4.980
	CRR073305	Juvenile bud 3	7.566
	CRR073306	Third green 1	8.646
	CRR073307	Third green 2	6.355
	CRR073308	Third green 3	7.630
	CRR073309	Second white 1	6.427
	CRR073310	Second white 2	11.018
	CRR073311	Second white 3	12.082
	CRR073312	Silver flowering 1	10.642
	CRR073313	Silver flowering 2	10.891
	CRR073314	Silver flowering 3	7.807
	CRR073315	Gold flowering 1	4.523
	CRR073316	Gold flowering 2	5.133
	CRR073317	Gold flowering 3	1.992
	CRR073318	Tawny withering 1	9.105
	CRR073319	Tawny withering 2	11.262
	CRR073320	Tawny withering 3	6.583