Detail information of GWHGAAZE017661


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007038060.16.50898E-54Calmodulin binding protein, putative [Theobroma cacao]
Swissprottr|P32295|ARG7_VIGRR2E-10Indole-3-acetic acid-induced protein ARG7
trEMBLtr|A0A061FZ72|A0A061FZ72_THECC2E-54Calmodulin binding protein, putative {ECO:0000313|EMBL:EOY22561.1}
TAIR10AT5G50760.15E-20SAUR-like auxin-responsive protein family

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene93003559300870+
GWHAAZE00000005mRNA93003559300870+
GWHAAZE00000005exon93003559300870+
GWHAAZE00000005CDS93003559300870+
Transcript Sequence

Network for GWHGAAZE017661

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02519.15Auxin_inducible371154.70E-22
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14488SAUR Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0009733biological_processresponse to auxin

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.391
SRR3591706second leaf0.239
SRR3591707mature leaf1.945
SRR3591708Shoot apex1.845
SRR3591709Stem9.193
SRR3591710White floral bud11.077
SRR3591711White flower13.527
SRR3591712Green floral bud9.085
SRR3591713Yellow flower69.209
SRP173429 SRR8316895Juvenile bud stage 1.668
SRR8316896Juvenile bud stage 9.730
SRR8316897Juvenile bud stage 2.400
SRR8316894Third green stage 3.446
SRR8316900Third green stage 14.678
SRR8316901Third green stage 18.209
SRR8316898Complete white stage 0.841
SRR8316899Complete white stage 2.539
SRR8316903Complete white stage 3.582
SRR8316902Silver flowering stage4.005
SRR8316904Silver flowering stage4.946
SRR8316905Silver flowering stage4.235
SRR8316906Gold flowering stage 12.760
SRR8316907Gold flowering stage 14.968
SRR8316908Gold flowering stage 8.535
SRP132670SRR6706286Control9.643
SRR6706287Light intensity 50%9.090
SRR6706288Light intensity 20%7.322
CNP0000432CNS0095592Slightly white alabastrum(diploid) 129.569
CNS0095593Slightly white alabastrum(diploid) 223.550
CNS0095594Slightly white alabastrum(diploid) 333.993
CNS0095595Whole white alabastrum(diploid) 241.730
CNS0095596Whole white alabastrum(diploid) 343.870
CNS0095597Whole white alabastrum(diploid) 453.569
CNS0095598Silvery flower (diploied) 116.192
CNS0095599Silvery flower (diploied) 214.150
CNS0095600Silvery flower (diploied) 312.159
CNS0095601Golden flower (diploid) 113.328
CNS0095602Golden flower (diploid) 218.862
CNS0095603Golden flower (diploid) 316.218
CNS0095604Slightly white alabastrum(tetraploid) 112.885
CNS0095605Slightly white alabastrum(tetraploid) 216.565
CNS0095606Slightly white alabastrum(tetraploid) 32.270
CNS0095607Whole white alabastrum(tetraploid) 114.358
CNS0095608Whole white alabastrum(tetraploid) 219.971
CNS0095609Whole white alabastrum(tetraploid) 314.006
CNS0095610Silvery flower (tetraploid) 112.518
CNS0095611Silvery flower (tetraploid) 211.998
CNS0095612Silvery flower (tetraploid) 38.568
CNS0095613Golden flower (tetraploid) 154.216
CNS0095614Golden flower (tetraploid) 237.116
CNS0095615Golden flower (tetraploid) 313.759
CRA001975CRR073297Stem 13.088
CRR073298Stem 23.789
CRR073299Stem 32.203
CRR073300Leaf 111.352
CRR073301Leaf 25.423
CRR073302Leaf 33.567
CRR073303Juvenile bud 15.527
CRR073304Juvenile bud 26.046
CRR073305Juvenile bud 31.318
CRR073306Third green 12.846
CRR073307Third green 23.137
CRR073308Third green 34.579
CRR073309Second white 11.029
CRR073310Second white 23.378
CRR073311Second white 31.929
CRR073312Silver flowering 14.517
CRR073313Silver flowering 24.198
CRR073314Silver flowering 30.637
CRR073315Gold flowering 14.149
CRR073316Gold flowering 20.803
CRR073317Gold flowering 30.599
CRR073318Tawny withering 110.938
CRR073319Tawny withering 26.395
CRR073320Tawny withering 35.149