Detail information of GWHGAAZE017377


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011080458.10PREDICTED: NADP-dependent malic enzyme-like [Sesamum indicum]
Swissprottr|P36444|MAOC_FLAPR0NADP-dependent malic enzyme, chloroplastic (Precursor)
trEMBLtr|A0A022S3G6|A0A022S3G6_ERYGU0Malic enzyme {ECO:0000256|RuleBase:RU003426}
TAIR10AT1G79750.10NADP-malic enzyme 4

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene53355975341677-
GWHAAZE00000005mRNA53355975341677-
GWHAAZE00000005exon53415835341677-
GWHAAZE00000005exon53409995341276-
GWHAAZE00000005exon53400655340185-
GWHAAZE00000005exon53398715339945-
GWHAAZE00000005exon53396055339756-
GWHAAZE00000005exon53393985339503-
GWHAAZE00000005exon53392405339305-
GWHAAZE00000005exon53388505339017-
GWHAAZE00000005exon53377175337800-
GWHAAZE00000005exon53375085337606-
GWHAAZE00000005exon53373295337376-
GWHAAZE00000005exon53370095337062-
GWHAAZE00000005exon53368175336915-
GWHAAZE00000005exon53366585336747-
GWHAAZE00000005exon53364755336552-
GWHAAZE00000005exon53362485336322-
GWHAAZE00000005exon53360645336154-
GWHAAZE00000005exon53357795335907-
GWHAAZE00000005exon53355975335685-
GWHAAZE00000005five_prime_UTR53416135341677-
GWHAAZE00000005CDS53415835341612-
GWHAAZE00000005CDS53409995341276-
GWHAAZE00000005CDS53400655340185-
GWHAAZE00000005CDS53398715339945-
GWHAAZE00000005CDS53396055339756-
GWHAAZE00000005CDS53393985339503-
GWHAAZE00000005CDS53392405339305-
GWHAAZE00000005CDS53388505339017-
GWHAAZE00000005CDS53377175337800-
GWHAAZE00000005CDS53375085337606-
GWHAAZE00000005CDS53373295337376-
GWHAAZE00000005CDS53370095337062-
GWHAAZE00000005CDS53368175336915-
GWHAAZE00000005CDS53366585336747-
GWHAAZE00000005CDS53364755336552-
GWHAAZE00000005CDS53362485336322-
GWHAAZE00000005CDS53360645336154-
GWHAAZE00000005CDS53357795335907-
GWHAAZE00000005CDS53355975335685-
Transcript Sequence

Network for GWHGAAZE017377

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00390.20malic1683482.70E-78
PF03949.16Malic_M3596111.80E-97
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00029E1.1.1.40, maeB Metabolic pathways map01100
Microbial metabolism in diverse environmentsmap01120
Carbon metabolismmap01200
Pyruvate metabolismmap00620
Carbon fixation in photosynthetic organismsmap00710
PPAR signaling pathwaymap03320

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0004471molecular_functionmalate dehydrogenase (decarboxylating) (NAD+) activity
GO:0004470molecular_functionmalic enzyme activity
GO:0051287molecular_functionNAD binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf209.709
SRR3591706second leaf205.073
SRR3591707mature leaf100.119
SRR3591708Shoot apex182.158
SRR3591709Stem186.058
SRR3591710White floral bud176.293
SRR3591711White flower227.569
SRR3591712Green floral bud145.256
SRR3591713Yellow flower310.804
SRP173429 SRR8316895Juvenile bud stage 96.436
SRR8316896Juvenile bud stage 108.592
SRR8316897Juvenile bud stage 65.514
SRR8316894Third green stage 45.313
SRR8316900Third green stage 123.235
SRR8316901Third green stage 135.661
SRR8316898Complete white stage 83.682
SRR8316899Complete white stage 159.210
SRR8316903Complete white stage 112.546
SRR8316902Silver flowering stage116.705
SRR8316904Silver flowering stage112.678
SRR8316905Silver flowering stage58.853
SRR8316906Gold flowering stage 249.436
SRR8316907Gold flowering stage 256.823
SRR8316908Gold flowering stage 300.028
SRP132670SRR6706286Control140.649
SRR6706287Light intensity 50%147.286
SRR6706288Light intensity 20%153.541
CNP0000432CNS0095592Slightly white alabastrum(diploid) 191.086
CNS0095593Slightly white alabastrum(diploid) 282.833
CNS0095594Slightly white alabastrum(diploid) 385.985
CNS0095595Whole white alabastrum(diploid) 2105.273
CNS0095596Whole white alabastrum(diploid) 391.427
CNS0095597Whole white alabastrum(diploid) 4111.823
CNS0095598Silvery flower (diploied) 1129.872
CNS0095599Silvery flower (diploied) 2122.554
CNS0095600Silvery flower (diploied) 3181.636
CNS0095601Golden flower (diploid) 1137.673
CNS0095602Golden flower (diploid) 2222.665
CNS0095603Golden flower (diploid) 3220.290
CNS0095604Slightly white alabastrum(tetraploid) 1101.296
CNS0095605Slightly white alabastrum(tetraploid) 289.086
CNS0095606Slightly white alabastrum(tetraploid) 3171.078
CNS0095607Whole white alabastrum(tetraploid) 1110.108
CNS0095608Whole white alabastrum(tetraploid) 2102.795
CNS0095609Whole white alabastrum(tetraploid) 3135.575
CNS0095610Silvery flower (tetraploid) 1217.869
CNS0095611Silvery flower (tetraploid) 2188.308
CNS0095612Silvery flower (tetraploid) 3109.469
CNS0095613Golden flower (tetraploid) 1200.691
CNS0095614Golden flower (tetraploid) 2242.710
CNS0095615Golden flower (tetraploid) 3267.349
CRA001975CRR073297Stem 1134.075
CRR073298Stem 2126.307
CRR073299Stem 3118.654
CRR073300Leaf 1155.073
CRR073301Leaf 2148.638
CRR073302Leaf 3134.816
CRR073303Juvenile bud 1134.749
CRR073304Juvenile bud 2107.873
CRR073305Juvenile bud 3165.208
CRR073306Third green 1229.879
CRR073307Third green 2196.781
CRR073308Third green 3223.695
CRR073309Second white 1117.704
CRR073310Second white 2135.809
CRR073311Second white 3163.823
CRR073312Silver flowering 1216.713
CRR073313Silver flowering 2172.146
CRR073314Silver flowering 3194.007
CRR073315Gold flowering 158.752
CRR073316Gold flowering 284.171
CRR073317Gold flowering 348.202
CRR073318Tawny withering 1154.203
CRR073319Tawny withering 2124.446
CRR073320Tawny withering 3187.356