Detail information of GWHGAAZE017272


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009607327.10PREDICTED: exportin-T isoform X1 [Nicotiana tomentosiformis]
Swissprottr|Q7PC79|XPOT_ARATH0Exportin-T
trEMBLtr|M1C3G4|M1C3G4_SOLTU0Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400058890}
TAIR10AT1G72560.30ARM repeat superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene36139683621588-
GWHAAZE00000005mRNA36139683621588-
GWHAAZE00000005exon36215833621588-
GWHAAZE00000005exon36191843620947-
GWHAAZE00000005exon36189813619070-
GWHAAZE00000005exon36187833618872-
GWHAAZE00000005exon36180903618194-
GWHAAZE00000005exon36177463617805-
GWHAAZE00000005exon36173093617371-
GWHAAZE00000005exon36171303617225-
GWHAAZE00000005exon36160083616172-
GWHAAZE00000005exon36156343615807-
GWHAAZE00000005exon36154553615520-
GWHAAZE00000005exon36152723615370-
GWHAAZE00000005exon36142033614349-
GWHAAZE00000005exon36139683614057-
GWHAAZE00000005CDS36215833621588-
GWHAAZE00000005CDS36191843620947-
GWHAAZE00000005CDS36189813619070-
GWHAAZE00000005CDS36187833618872-
GWHAAZE00000005CDS36180903618194-
GWHAAZE00000005CDS36177463617805-
GWHAAZE00000005CDS36173093617371-
GWHAAZE00000005CDS36171303617225-
GWHAAZE00000005CDS36160083616172-
GWHAAZE00000005CDS36156343615807-
GWHAAZE00000005CDS36154553615520-
GWHAAZE00000005CDS36152723615370-
GWHAAZE00000005CDS36142033614349-
GWHAAZE00000005CDS36139683614057-
Transcript Sequence

Network for GWHGAAZE017272

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08389.13Xpo11222747.90E-34
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14288XPOT RNA transport map03013

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf13.137
SRR3591706second leaf11.880
SRR3591707mature leaf11.699
SRR3591708Shoot apex11.533
SRR3591709Stem17.159
SRR3591710White floral bud13.137
SRR3591711White flower14.585
SRR3591712Green floral bud12.362
SRR3591713Yellow flower12.277
SRP173429 SRR8316895Juvenile bud stage 7.530
SRR8316896Juvenile bud stage 9.240
SRR8316897Juvenile bud stage 3.619
SRR8316894Third green stage 4.495
SRR8316900Third green stage 9.942
SRR8316901Third green stage 10.072
SRR8316898Complete white stage 4.364
SRR8316899Complete white stage 14.408
SRR8316903Complete white stage 7.996
SRR8316902Silver flowering stage4.367
SRR8316904Silver flowering stage10.054
SRR8316905Silver flowering stage3.120
SRR8316906Gold flowering stage 10.977
SRR8316907Gold flowering stage 9.129
SRR8316908Gold flowering stage 12.135
SRP132670SRR6706286Control6.624
SRR6706287Light intensity 50%7.665
SRR6706288Light intensity 20%8.770
CNP0000432CNS0095592Slightly white alabastrum(diploid) 15.900
CNS0095593Slightly white alabastrum(diploid) 25.147
CNS0095594Slightly white alabastrum(diploid) 34.665
CNS0095595Whole white alabastrum(diploid) 24.325
CNS0095596Whole white alabastrum(diploid) 34.091
CNS0095597Whole white alabastrum(diploid) 43.368
CNS0095598Silvery flower (diploied) 17.520
CNS0095599Silvery flower (diploied) 24.967
CNS0095600Silvery flower (diploied) 38.816
CNS0095601Golden flower (diploid) 15.647
CNS0095602Golden flower (diploid) 28.043
CNS0095603Golden flower (diploid) 37.551
CNS0095604Slightly white alabastrum(tetraploid) 17.413
CNS0095605Slightly white alabastrum(tetraploid) 24.919
CNS0095606Slightly white alabastrum(tetraploid) 311.500
CNS0095607Whole white alabastrum(tetraploid) 13.023
CNS0095608Whole white alabastrum(tetraploid) 22.318
CNS0095609Whole white alabastrum(tetraploid) 37.970
CNS0095610Silvery flower (tetraploid) 112.561
CNS0095611Silvery flower (tetraploid) 210.214
CNS0095612Silvery flower (tetraploid) 38.447
CNS0095613Golden flower (tetraploid) 15.089
CNS0095614Golden flower (tetraploid) 28.470
CNS0095615Golden flower (tetraploid) 310.253
CRA001975CRR073297Stem 18.234
CRR073298Stem 27.265
CRR073299Stem 34.379
CRR073300Leaf 18.694
CRR073301Leaf 27.677
CRR073302Leaf 34.615
CRR073303Juvenile bud 15.154
CRR073304Juvenile bud 22.627
CRR073305Juvenile bud 37.202
CRR073306Third green 11.089
CRR073307Third green 21.395
CRR073308Third green 31.335
CRR073309Second white 12.368
CRR073310Second white 23.073
CRR073311Second white 33.288
CRR073312Silver flowering 11.973
CRR073313Silver flowering 22.606
CRR073314Silver flowering 31.743
CRR073315Gold flowering 12.342
CRR073316Gold flowering 24.241
CRR073317Gold flowering 30.877
CRR073318Tawny withering 13.876
CRR073319Tawny withering 23.742
CRR073320Tawny withering 34.265