Detail information of GWHGAAZE017228


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAFV96170.12.8626E-151ubiquitin conjugating enzyme J2 [Camellia oleifera]
Swissprottr|Q9FK29|UBC33_ARATH2E-130Probable ubiquitin-conjugating enzyme E2 33
trEMBLtr|K7S6F2|K7S6F2_9ERIC1E-151Ubiquitin conjugating enzyme J2 {ECO:0000313|EMBL:AFV96170.1}
TAIR10AT5G50430.26E-103ubiquitin-conjugating enzyme 33

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene28450462855959-
GWHAAZE00000005mRNA28450462855959-
GWHAAZE00000005exon28559032855959-
GWHAAZE00000005exon28557022855756-
GWHAAZE00000005exon28470412847079-
GWHAAZE00000005exon28468262846889-
GWHAAZE00000005exon28466572846718-
GWHAAZE00000005exon28465282846567-
GWHAAZE00000005exon28464002846427-
GWHAAZE00000005exon28454752845566-
GWHAAZE00000005exon28450462845334-
GWHAAZE00000005CDS28559032855959-
GWHAAZE00000005CDS28557022855756-
GWHAAZE00000005CDS28470412847079-
GWHAAZE00000005CDS28468262846889-
GWHAAZE00000005CDS28466572846718-
GWHAAZE00000005CDS28465282846567-
GWHAAZE00000005CDS28464002846427-
GWHAAZE00000005CDS28454752845566-
GWHAAZE00000005CDS28450462845334-
Transcript Sequence

Network for GWHGAAZE017228

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00179.27UQ_con91237.00E-20
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyUBC

KEGG pathway

KO Enzyme pathway mapID
K04554UBE2J2, NCUBE2, UBC6 Protein processing in endoplasmic reticulum map04141
Ubiquitin mediated proteolysismap04120

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf65.254
SRR3591706second leaf30.132
SRR3591707mature leaf37.302
SRR3591708Shoot apex59.616
SRR3591709Stem59.798
SRR3591710White floral bud56.689
SRR3591711White flower58.460
SRR3591712Green floral bud53.453
SRR3591713Yellow flower45.206
SRP173429 SRR8316895Juvenile bud stage 30.626
SRR8316896Juvenile bud stage 44.598
SRR8316897Juvenile bud stage 27.619
SRR8316894Third green stage 17.145
SRR8316900Third green stage 53.627
SRR8316901Third green stage 52.206
SRR8316898Complete white stage 28.836
SRR8316899Complete white stage 84.537
SRR8316903Complete white stage 40.991
SRR8316902Silver flowering stage28.684
SRR8316904Silver flowering stage33.594
SRR8316905Silver flowering stage18.283
SRR8316906Gold flowering stage 65.751
SRR8316907Gold flowering stage 54.261
SRR8316908Gold flowering stage 54.177
SRP132670SRR6706286Control48.176
SRR6706287Light intensity 50%46.222
SRR6706288Light intensity 20%51.880
CNP0000432CNS0095592Slightly white alabastrum(diploid) 144.022
CNS0095593Slightly white alabastrum(diploid) 244.008
CNS0095594Slightly white alabastrum(diploid) 334.689
CNS0095595Whole white alabastrum(diploid) 235.635
CNS0095596Whole white alabastrum(diploid) 328.555
CNS0095597Whole white alabastrum(diploid) 436.300
CNS0095598Silvery flower (diploied) 139.368
CNS0095599Silvery flower (diploied) 236.335
CNS0095600Silvery flower (diploied) 349.966
CNS0095601Golden flower (diploid) 140.476
CNS0095602Golden flower (diploid) 253.499
CNS0095603Golden flower (diploid) 355.045
CNS0095604Slightly white alabastrum(tetraploid) 153.486
CNS0095605Slightly white alabastrum(tetraploid) 242.206
CNS0095606Slightly white alabastrum(tetraploid) 373.408
CNS0095607Whole white alabastrum(tetraploid) 144.567
CNS0095608Whole white alabastrum(tetraploid) 246.828
CNS0095609Whole white alabastrum(tetraploid) 356.367
CNS0095610Silvery flower (tetraploid) 151.678
CNS0095611Silvery flower (tetraploid) 262.612
CNS0095612Silvery flower (tetraploid) 342.446
CNS0095613Golden flower (tetraploid) 136.894
CNS0095614Golden flower (tetraploid) 247.190
CNS0095615Golden flower (tetraploid) 351.434
CRA001975CRR073297Stem 174.164
CRR073298Stem 260.155
CRR073299Stem 373.667
CRR073300Leaf 176.800
CRR073301Leaf 266.155
CRR073302Leaf 380.919
CRR073303Juvenile bud 177.874
CRR073304Juvenile bud 252.501
CRR073305Juvenile bud 386.983
CRR073306Third green 142.272
CRR073307Third green 247.379
CRR073308Third green 340.515
CRR073309Second white 147.506
CRR073310Second white 244.690
CRR073311Second white 331.849
CRR073312Silver flowering 146.976
CRR073313Silver flowering 259.915
CRR073314Silver flowering 335.959
CRR073315Gold flowering 146.613
CRR073316Gold flowering 258.657
CRR073317Gold flowering 358.829
CRR073318Tawny withering 193.426
CRR073319Tawny withering 297.476
CRR073320Tawny withering 392.169