Detail information of GWHGAAZE017222


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010029524.10PREDICTED: 26S protease regulatory subunit 7 [Eucalyptus grandis]
Swissprottr|Q9FXT9|PRS7_ORYSJ026S protease regulatory subunit 7
trEMBLtr|A0A059AS18|A0A059AS18_EUCGR0Uncharacterized protein {ECO:0000313|EMBL:KCW56441.1}
TAIR10AT1G53750.10regulatory particle triple-A 1A

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000005gene27743942782586-
GWHAAZE00000005mRNA27743942782586-
GWHAAZE00000005exon27824362782586-
GWHAAZE00000005exon27809472781045-
GWHAAZE00000005exon27804782780569-
GWHAAZE00000005exon27803232780400-
GWHAAZE00000005exon27783732778434-
GWHAAZE00000005exon27772062777350-
GWHAAZE00000005exon27768472777065-
GWHAAZE00000005exon27765852776766-
GWHAAZE00000005exon27761212776296-
GWHAAZE00000005exon27743942774820-
GWHAAZE00000005CDS27824362782586-
GWHAAZE00000005CDS27809472781045-
GWHAAZE00000005CDS27804782780569-
GWHAAZE00000005CDS27803232780400-
GWHAAZE00000005CDS27783732778434-
GWHAAZE00000005CDS27772062777350-
GWHAAZE00000005CDS27768472777065-
GWHAAZE00000005CDS27765852776766-
GWHAAZE00000005CDS27761212776296-
GWHAAZE00000005CDS27746632774820-
GWHAAZE00000005three_prime_UTR27743942774662-
Transcript Sequence

Network for GWHGAAZE017222

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00004.30AAA2323642.70E-39
PF17862.2AAA_lid_33874303.40E-11
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03061PSMC2, RPT1 Proteasome map03050

Gene Ontology

GO term OntologyName
GO:0030163biological_processprotein catabolic process
GO:0005737cellular_componentcytoplasm
GO:0016787molecular_functionhydrolase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf181.632
SRR3591706second leaf97.886
SRR3591707mature leaf86.857
SRR3591708Shoot apex153.270
SRR3591709Stem158.289
SRR3591710White floral bud186.175
SRR3591711White flower288.305
SRR3591712Green floral bud194.077
SRR3591713Yellow flower315.952
SRP173429 SRR8316895Juvenile bud stage 102.329
SRR8316896Juvenile bud stage 154.740
SRR8316897Juvenile bud stage 64.900
SRR8316894Third green stage 62.299
SRR8316900Third green stage 194.763
SRR8316901Third green stage 192.396
SRR8316898Complete white stage 98.890
SRR8316899Complete white stage 292.096
SRR8316903Complete white stage 131.451
SRR8316902Silver flowering stage117.504
SRR8316904Silver flowering stage130.299
SRR8316905Silver flowering stage68.856
SRR8316906Gold flowering stage 317.669
SRR8316907Gold flowering stage 277.443
SRR8316908Gold flowering stage 299.687
SRP132670SRR6706286Control206.705
SRR6706287Light intensity 50%193.100
SRR6706288Light intensity 20%206.608
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1147.040
CNS0095593Slightly white alabastrum(diploid) 2161.791
CNS0095594Slightly white alabastrum(diploid) 3131.134
CNS0095595Whole white alabastrum(diploid) 2135.742
CNS0095596Whole white alabastrum(diploid) 3132.987
CNS0095597Whole white alabastrum(diploid) 4125.801
CNS0095598Silvery flower (diploied) 1153.940
CNS0095599Silvery flower (diploied) 2163.886
CNS0095600Silvery flower (diploied) 3235.671
CNS0095601Golden flower (diploid) 1169.805
CNS0095602Golden flower (diploid) 2247.792
CNS0095603Golden flower (diploid) 3236.973
CNS0095604Slightly white alabastrum(tetraploid) 1146.744
CNS0095605Slightly white alabastrum(tetraploid) 2133.160
CNS0095606Slightly white alabastrum(tetraploid) 3203.827
CNS0095607Whole white alabastrum(tetraploid) 1113.701
CNS0095608Whole white alabastrum(tetraploid) 2109.479
CNS0095609Whole white alabastrum(tetraploid) 3167.663
CNS0095610Silvery flower (tetraploid) 1232.549
CNS0095611Silvery flower (tetraploid) 2228.719
CNS0095612Silvery flower (tetraploid) 3185.398
CNS0095613Golden flower (tetraploid) 1193.097
CNS0095614Golden flower (tetraploid) 2249.430
CNS0095615Golden flower (tetraploid) 3313.008
CRA001975CRR073297Stem 1159.943
CRR073298Stem 2156.419
CRR073299Stem 3165.472
CRR073300Leaf 1186.540
CRR073301Leaf 2185.867
CRR073302Leaf 3204.049
CRR073303Juvenile bud 1198.700
CRR073304Juvenile bud 2187.183
CRR073305Juvenile bud 3204.342
CRR073306Third green 1117.656
CRR073307Third green 2111.529
CRR073308Third green 3110.352
CRR073309Second white 1196.870
CRR073310Second white 2210.348
CRR073311Second white 3160.090
CRR073312Silver flowering 1152.790
CRR073313Silver flowering 2161.370
CRR073314Silver flowering 3133.421
CRR073315Gold flowering 1101.021
CRR073316Gold flowering 2107.286
CRR073317Gold flowering 3102.977
CRR073318Tawny withering 1175.349
CRR073319Tawny withering 2159.510
CRR073320Tawny withering 3169.169