Detail information of GWHGAAZE017112


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002277540.10PREDICTED: respiratory burst oxidase homolog protein E isoform X1 [Vitis vinifera]
Swissprottr|O81211|RBOHE_ARATH0Respiratory burst oxidase homolog protein E
trEMBLtr|D7TCA4|D7TCA4_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI27762.3}
TAIR10AT1G19230.10Riboflavin synthase-like superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene9194984491956803-
GWHAAZE00000004mRNA9194984491956803-
GWHAAZE00000004exon9194984491949953-
GWHAAZE00000004exon9195002891950106-
GWHAAZE00000004exon9195085991950987-
GWHAAZE00000004exon9195110991951297-
GWHAAZE00000004exon9195140291951558-
GWHAAZE00000004exon9195166691951836-
GWHAAZE00000004exon9195194491952059-
GWHAAZE00000004exon9195213991952234-
GWHAAZE00000004exon9195235391952736-
GWHAAZE00000004exon9195303091953452-
GWHAAZE00000004exon9195353991953652-
GWHAAZE00000004exon9195458191954629-
GWHAAZE00000004exon9195576191955920-
GWHAAZE00000004exon9195625791956803-
GWHAAZE00000004CDS9195625791956803-
GWHAAZE00000004CDS9195576191955920-
GWHAAZE00000004CDS9195458191954629-
GWHAAZE00000004CDS9195353991953652-
GWHAAZE00000004CDS9195303091953452-
GWHAAZE00000004CDS9195235391952736-
GWHAAZE00000004CDS9195213991952234-
GWHAAZE00000004CDS9195194491952059-
GWHAAZE00000004CDS9195166691951836-
GWHAAZE00000004CDS9195140291951558-
GWHAAZE00000004CDS9195110991951297-
GWHAAZE00000004CDS9195085991950987-
GWHAAZE00000004CDS9195002891950106-
GWHAAZE00000004CDS9194984491949953-
Transcript Sequence

Network for GWHGAAZE017112

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08414.11NADPH_Ox1262284.40E-38
PF01794.20Ferric_reduct3885428.10E-17
PF08022.13FAD_binding_85877006.90E-29
PF08030.13NAD_binding_67078886.70E-51
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13447RBOH MAPK signaling pathway - plant map04016
Plant-pathogen interactionmap04626

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0016020cellular_componentmembrane
GO:0005509molecular_functioncalcium ion binding
GO:0016491molecular_functionoxidoreductase activity
GO:0004601molecular_functionperoxidase activity
GO:0050664molecular_functionoxidoreductase activity, acting on NAD(P)H, oxygen as acceptor

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf12.589
SRR3591706second leaf0.179
SRR3591707mature leaf0.034
SRR3591708Shoot apex0.166
SRR3591709Stem21.850
SRR3591710White floral bud0.658
SRR3591711White flower0.406
SRR3591712Green floral bud0.148
SRR3591713Yellow flower0.041
SRP173429 SRR8316895Juvenile bud stage 0.594
SRR8316896Juvenile bud stage 0.354
SRR8316897Juvenile bud stage 0.218
SRR8316894Third green stage 0.150
SRR8316900Third green stage 0.229
SRR8316901Third green stage 0.155
SRR8316898Complete white stage 0.066
SRR8316899Complete white stage 0.149
SRR8316903Complete white stage 0.151
SRR8316902Silver flowering stage0.020
SRR8316904Silver flowering stage0.107
SRR8316905Silver flowering stage0.071
SRR8316906Gold flowering stage 0.099
SRR8316907Gold flowering stage 0.006
SRR8316908Gold flowering stage 0.044
SRP132670SRR6706286Control0.052
SRR6706287Light intensity 50%0.194
SRR6706288Light intensity 20%0.064
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.079
CNS0095593Slightly white alabastrum(diploid) 20.350
CNS0095594Slightly white alabastrum(diploid) 30.115
CNS0095595Whole white alabastrum(diploid) 20.136
CNS0095596Whole white alabastrum(diploid) 30.059
CNS0095597Whole white alabastrum(diploid) 40.021
CNS0095598Silvery flower (diploied) 10.034
CNS0095599Silvery flower (diploied) 20.102
CNS0095600Silvery flower (diploied) 30.177
CNS0095601Golden flower (diploid) 10.275
CNS0095602Golden flower (diploid) 20.122
CNS0095603Golden flower (diploid) 30.192
CNS0095604Slightly white alabastrum(tetraploid) 10.091
CNS0095605Slightly white alabastrum(tetraploid) 20.116
CNS0095606Slightly white alabastrum(tetraploid) 30.136
CNS0095607Whole white alabastrum(tetraploid) 10.089
CNS0095608Whole white alabastrum(tetraploid) 20.032
CNS0095609Whole white alabastrum(tetraploid) 30.188
CNS0095610Silvery flower (tetraploid) 10.195
CNS0095611Silvery flower (tetraploid) 20.186
CNS0095612Silvery flower (tetraploid) 30.079
CNS0095613Golden flower (tetraploid) 10.100
CNS0095614Golden flower (tetraploid) 20.062
CNS0095615Golden flower (tetraploid) 30.042
CRA001975CRR073297Stem 10.546
CRR073298Stem 20.281
CRR073299Stem 30.041
CRR073300Leaf 10.393
CRR073301Leaf 20.292
CRR073302Leaf 30.084
CRR073303Juvenile bud 10.142
CRR073304Juvenile bud 20.034
CRR073305Juvenile bud 30.081
CRR073306Third green 10.100
CRR073307Third green 20.000
CRR073308Third green 30.138
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.018
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.003
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.001
CRR073318Tawny withering 15.333
CRR073319Tawny withering 21.660
CRR073320Tawny withering 36.967