Detail information of GWHGAAZE016860


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006441392.11.4116E-101hypothetical protein CICLE_v10022594mg [Citrus clementina]
trEMBLtr|A0A067EXA0|A0A067EXA0_CITSI5E-102Uncharacterized protein {ECO:0000313|EMBL:KDO59688.1}
TAIR10AT1G73230.11E-60Nascent polypeptide-associated complex NAC

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene8427597884278380-
GWHAAZE00000004mRNA8427597884278380-
GWHAAZE00000004exon8427597884276150-
GWHAAZE00000004exon8427681884276856-
GWHAAZE00000004exon8427712084277176-
GWHAAZE00000004exon8427727684277424-
GWHAAZE00000004exon8427831384278380-
GWHAAZE00000004CDS8427831384278380-
GWHAAZE00000004CDS8427727684277424-
GWHAAZE00000004CDS8427712084277176-
GWHAAZE00000004CDS8427681884276856-
GWHAAZE00000004CDS8427597884276150-
Transcript Sequence

Network for GWHGAAZE016860

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01849.19NAC36913.60E-19
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K01527EGD1, BTF3 Apoptosis - fly map04214

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf332.124
SRR3591706second leaf201.610
SRR3591707mature leaf126.303
SRR3591708Shoot apex435.827
SRR3591709Stem210.623
SRR3591710White floral bud193.386
SRR3591711White flower248.069
SRR3591712Green floral bud312.514
SRR3591713Yellow flower182.913
SRP173429 SRR8316895Juvenile bud stage 110.038
SRR8316896Juvenile bud stage 159.060
SRR8316897Juvenile bud stage 87.256
SRR8316894Third green stage 65.622
SRR8316900Third green stage 194.245
SRR8316901Third green stage 195.856
SRR8316898Complete white stage 65.770
SRR8316899Complete white stage 165.453
SRR8316903Complete white stage 83.900
SRR8316902Silver flowering stage54.322
SRR8316904Silver flowering stage58.783
SRR8316905Silver flowering stage32.820
SRR8316906Gold flowering stage 96.749
SRR8316907Gold flowering stage 117.703
SRR8316908Gold flowering stage 115.287
SRP132670SRR6706286Control296.860
SRR6706287Light intensity 50%271.211
SRR6706288Light intensity 20%331.420
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1240.745
CNS0095593Slightly white alabastrum(diploid) 2291.084
CNS0095594Slightly white alabastrum(diploid) 3239.020
CNS0095595Whole white alabastrum(diploid) 2196.780
CNS0095596Whole white alabastrum(diploid) 3241.702
CNS0095597Whole white alabastrum(diploid) 4166.181
CNS0095598Silvery flower (diploied) 1167.522
CNS0095599Silvery flower (diploied) 2163.881
CNS0095600Silvery flower (diploied) 3137.796
CNS0095601Golden flower (diploid) 1135.047
CNS0095602Golden flower (diploid) 2124.179
CNS0095603Golden flower (diploid) 3126.912
CNS0095604Slightly white alabastrum(tetraploid) 1215.937
CNS0095605Slightly white alabastrum(tetraploid) 2216.955
CNS0095606Slightly white alabastrum(tetraploid) 3256.488
CNS0095607Whole white alabastrum(tetraploid) 1116.421
CNS0095608Whole white alabastrum(tetraploid) 2116.354
CNS0095609Whole white alabastrum(tetraploid) 3184.142
CNS0095610Silvery flower (tetraploid) 1128.468
CNS0095611Silvery flower (tetraploid) 2123.384
CNS0095612Silvery flower (tetraploid) 3144.783
CNS0095613Golden flower (tetraploid) 1118.845
CNS0095614Golden flower (tetraploid) 2123.093
CNS0095615Golden flower (tetraploid) 3106.924
CRA001975CRR073297Stem 1131.779
CRR073298Stem 2127.671
CRR073299Stem 3154.649
CRR073300Leaf 1120.214
CRR073301Leaf 2141.368
CRR073302Leaf 3157.035
CRR073303Juvenile bud 1124.900
CRR073304Juvenile bud 2116.079
CRR073305Juvenile bud 3139.727
CRR073306Third green 162.701
CRR073307Third green 256.182
CRR073308Third green 361.213
CRR073309Second white 162.201
CRR073310Second white 242.737
CRR073311Second white 341.140
CRR073312Silver flowering 147.471
CRR073313Silver flowering 275.049
CRR073314Silver flowering 360.336
CRR073315Gold flowering 188.228
CRR073316Gold flowering 291.617
CRR073317Gold flowering 372.343
CRR073318Tawny withering 1118.427
CRR073319Tawny withering 2119.790
CRR073320Tawny withering 3123.433