Detail information of GWHGAAZE016805


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_003532154.10PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g63710-like [Glycine max]
Swissprottr|Q8W4S5|Y5371_ARATH0Probable LRR receptor-like serine/threonine-protein kinase At5g63710 (Precursor)
trEMBLtr|I1KNY9|I1KNY9_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G00650.1}
TAIR10AT5G63710.19E-158Leucine-rich repeat protein kinase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene8317235083176483+
GWHAAZE00000004mRNA8317235083176483+
GWHAAZE00000004exon8317235083172371+
GWHAAZE00000004exon8317386183174202+
GWHAAZE00000004exon8317495683175350+
GWHAAZE00000004exon8317617283176483+
GWHAAZE00000004CDS8317235083172371+
GWHAAZE00000004CDS8317386183174202+
GWHAAZE00000004CDS8317495683175350+
GWHAAZE00000004CDS8317617283176483+
Transcript Sequence

Network for GWHGAAZE016805

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0064Protein Kinases RLK-Pelle_LRR-II family Protein Kinases RLK-Pelle_LRR-II
GO:0006662 glycerol ether metabolic process GOslim:biological_process
map04621 NOD-like receptor signaling pathway
GO:0045454 cell redox homeostasis GOslim:biological_process
GO:0015035 protein disulfide oxidoreductase activity GOslim:molecular_function


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.26Pkinase353051.30E-44
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_LRR-II

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf7.887
SRR3591706second leaf7.326
SRR3591707mature leaf43.979
SRR3591708Shoot apex10.626
SRR3591709Stem23.159
SRR3591710White floral bud6.441
SRR3591711White flower5.835
SRR3591712Green floral bud5.708
SRR3591713Yellow flower1.874
SRP173429 SRR8316895Juvenile bud stage 3.213
SRR8316896Juvenile bud stage 5.810
SRR8316897Juvenile bud stage 2.739
SRR8316894Third green stage 3.684
SRR8316900Third green stage 5.989
SRR8316901Third green stage 5.434
SRR8316898Complete white stage 1.836
SRR8316899Complete white stage 14.810
SRR8316903Complete white stage 3.826
SRR8316902Silver flowering stage2.507
SRR8316904Silver flowering stage3.748
SRR8316905Silver flowering stage1.353
SRR8316906Gold flowering stage 3.269
SRR8316907Gold flowering stage 2.717
SRR8316908Gold flowering stage 3.338
SRP132670SRR6706286Control7.653
SRR6706287Light intensity 50%8.107
SRR6706288Light intensity 20%8.746
CNP0000432CNS0095592Slightly white alabastrum(diploid) 15.815
CNS0095593Slightly white alabastrum(diploid) 25.866
CNS0095594Slightly white alabastrum(diploid) 35.659
CNS0095595Whole white alabastrum(diploid) 27.325
CNS0095596Whole white alabastrum(diploid) 33.800
CNS0095597Whole white alabastrum(diploid) 45.565
CNS0095598Silvery flower (diploied) 120.169
CNS0095599Silvery flower (diploied) 218.082
CNS0095600Silvery flower (diploied) 36.462
CNS0095601Golden flower (diploid) 114.796
CNS0095602Golden flower (diploid) 24.179
CNS0095603Golden flower (diploid) 34.242
CNS0095604Slightly white alabastrum(tetraploid) 16.573
CNS0095605Slightly white alabastrum(tetraploid) 25.571
CNS0095606Slightly white alabastrum(tetraploid) 37.375
CNS0095607Whole white alabastrum(tetraploid) 15.915
CNS0095608Whole white alabastrum(tetraploid) 24.628
CNS0095609Whole white alabastrum(tetraploid) 35.514
CNS0095610Silvery flower (tetraploid) 15.452
CNS0095611Silvery flower (tetraploid) 25.048
CNS0095612Silvery flower (tetraploid) 33.515
CNS0095613Golden flower (tetraploid) 12.114
CNS0095614Golden flower (tetraploid) 22.740
CNS0095615Golden flower (tetraploid) 31.147
CRA001975CRR073297Stem 16.638
CRR073298Stem 24.438
CRR073299Stem 32.202
CRR073300Leaf 17.266
CRR073301Leaf 27.355
CRR073302Leaf 31.995
CRR073303Juvenile bud 15.577
CRR073304Juvenile bud 21.525
CRR073305Juvenile bud 35.354
CRR073306Third green 11.311
CRR073307Third green 20.269
CRR073308Third green 31.146
CRR073309Second white 10.381
CRR073310Second white 21.040
CRR073311Second white 30.613
CRR073312Silver flowering 10.401
CRR073313Silver flowering 20.234
CRR073314Silver flowering 30.285
CRR073315Gold flowering 113.566
CRR073316Gold flowering 220.711
CRR073317Gold flowering 38.305
CRR073318Tawny withering 125.535
CRR073319Tawny withering 250.928
CRR073320Tawny withering 329.479