Detail information of GWHGAAZE016747


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006855902.12.69811E-13hypothetical protein AMTR_s00037p00169980 [Amborella trichopoda]
Swissprottr|Q9SSE9|JMJ25_ARATH0.000001Lysine-specific demethylase JMJ25
trEMBLtr|U5D4J3|U5D4J3_AMBTC1E-13Uncharacterized protein {ECO:0000313|EMBL:ERN17369.1}

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene8194650581947174-
GWHAAZE00000004mRNA8194650581947174-
GWHAAZE00000004exon8194650581946627-
GWHAAZE00000004exon8194685781947174-
GWHAAZE00000004CDS8194685781947174-
GWHAAZE00000004CDS8194650581946627-
Transcript Sequence

Network for GWHGAAZE016747

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K15601KDM3 Thermogenesis map04714

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.598
SRR3591706second leaf1.915
SRR3591707mature leaf0.931
SRR3591708Shoot apex1.852
SRR3591709Stem0.701
SRR3591710White floral bud3.934
SRR3591711White flower3.476
SRR3591712Green floral bud4.704
SRR3591713Yellow flower4.906
SRP173429 SRR8316895Juvenile bud stage 2.139
SRR8316896Juvenile bud stage 2.625
SRR8316897Juvenile bud stage 1.733
SRR8316894Third green stage 1.685
SRR8316900Third green stage 3.383
SRR8316901Third green stage 2.855
SRR8316898Complete white stage 1.664
SRR8316899Complete white stage 3.300
SRR8316903Complete white stage 2.315
SRR8316902Silver flowering stage0.670
SRR8316904Silver flowering stage2.613
SRR8316905Silver flowering stage1.179
SRR8316906Gold flowering stage 3.764
SRR8316907Gold flowering stage 2.965
SRR8316908Gold flowering stage 3.826
SRP132670SRR6706286Control6.283
SRR6706287Light intensity 50%6.316
SRR6706288Light intensity 20%6.914
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.116
CNS0095593Slightly white alabastrum(diploid) 20.634
CNS0095594Slightly white alabastrum(diploid) 31.230
CNS0095595Whole white alabastrum(diploid) 20.747
CNS0095596Whole white alabastrum(diploid) 31.428
CNS0095597Whole white alabastrum(diploid) 41.052
CNS0095598Silvery flower (diploied) 13.198
CNS0095599Silvery flower (diploied) 20.734
CNS0095600Silvery flower (diploied) 36.412
CNS0095601Golden flower (diploid) 10.348
CNS0095602Golden flower (diploid) 23.217
CNS0095603Golden flower (diploid) 33.709
CNS0095604Slightly white alabastrum(tetraploid) 12.371
CNS0095605Slightly white alabastrum(tetraploid) 21.379
CNS0095606Slightly white alabastrum(tetraploid) 33.542
CNS0095607Whole white alabastrum(tetraploid) 11.630
CNS0095608Whole white alabastrum(tetraploid) 20.392
CNS0095609Whole white alabastrum(tetraploid) 34.640
CNS0095610Silvery flower (tetraploid) 15.822
CNS0095611Silvery flower (tetraploid) 27.990
CNS0095612Silvery flower (tetraploid) 33.052
CNS0095613Golden flower (tetraploid) 14.035
CNS0095614Golden flower (tetraploid) 24.410
CNS0095615Golden flower (tetraploid) 32.556
CRA001975CRR073297Stem 12.137
CRR073298Stem 25.203
CRR073299Stem 32.820
CRR073300Leaf 14.578
CRR073301Leaf 24.815
CRR073302Leaf 33.003
CRR073303Juvenile bud 13.842
CRR073304Juvenile bud 23.312
CRR073305Juvenile bud 32.170
CRR073306Third green 10.028
CRR073307Third green 20.362
CRR073308Third green 30.000
CRR073309Second white 10.677
CRR073310Second white 20.255
CRR073311Second white 30.688
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.437
CRR073315Gold flowering 12.118
CRR073316Gold flowering 22.327
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.214
CRR073319Tawny withering 21.182
CRR073320Tawny withering 30.208