Detail information of GWHGAAZE016729


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006466193.10PREDICTED: ferrochelatase-2, chloroplastic-like isoform X1 [Citrus sinensis]
Swissprottr|A2Y3Q5|HEMH_ORYSI0Ferrochelatase-2, chloroplastic (Precursor)
trEMBLtr|G7LGG4|G7LGG4_MEDTR0Ferrochelatase {ECO:0000256|RuleBase:RU000607}
TAIR10AT2G30390.12E-171ferrochelatase 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene8167668681681570-
GWHAAZE00000004mRNA8167668681681570-
GWHAAZE00000004exon8168143281681570-
GWHAAZE00000004exon8168117281681275-
GWHAAZE00000004exon8168095281681078-
GWHAAZE00000004exon8168010381680255-
GWHAAZE00000004exon8167820981678309-
GWHAAZE00000004exon8167786281678063-
GWHAAZE00000004exon8167668681677296-
GWHAAZE00000004five_prime_UTR8168154081681570-
GWHAAZE00000004CDS8168143281681539-
GWHAAZE00000004CDS8168117281681275-
GWHAAZE00000004CDS8168095281681078-
GWHAAZE00000004CDS8168010381680255-
GWHAAZE00000004CDS8167820981678309-
GWHAAZE00000004CDS8167786281678063-
GWHAAZE00000004CDS8167707281677296-
GWHAAZE00000004three_prime_UTR8167668681677071-
Transcript Sequence

Network for GWHGAAZE016729

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00762.20Ferrochelatase22498.90E-83
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01772hemH, FECH Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Porphyrin and chlorophyll metabolismmap00860

Gene Ontology

GO term OntologyName
GO:0006783biological_processheme biosynthetic process
GO:0004325molecular_functionferrochelatase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf53.116
SRR3591706second leaf78.998
SRR3591707mature leaf112.223
SRR3591708Shoot apex57.669
SRR3591709Stem41.737
SRR3591710White floral bud24.383
SRR3591711White flower33.949
SRR3591712Green floral bud32.783
SRR3591713Yellow flower25.200
SRP173429 SRR8316895Juvenile bud stage 26.807
SRR8316896Juvenile bud stage 28.539
SRR8316897Juvenile bud stage 16.616
SRR8316894Third green stage 11.442
SRR8316900Third green stage 39.938
SRR8316901Third green stage 30.345
SRR8316898Complete white stage 10.202
SRR8316899Complete white stage 42.583
SRR8316903Complete white stage 15.493
SRR8316902Silver flowering stage10.156
SRR8316904Silver flowering stage12.395
SRR8316905Silver flowering stage5.135
SRR8316906Gold flowering stage 18.181
SRR8316907Gold flowering stage 21.087
SRR8316908Gold flowering stage 24.698
SRP132670SRR6706286Control24.943
SRR6706287Light intensity 50%24.016
SRR6706288Light intensity 20%27.031
CNP0000432CNS0095592Slightly white alabastrum(diploid) 127.281
CNS0095593Slightly white alabastrum(diploid) 227.027
CNS0095594Slightly white alabastrum(diploid) 326.352
CNS0095595Whole white alabastrum(diploid) 226.944
CNS0095596Whole white alabastrum(diploid) 321.602
CNS0095597Whole white alabastrum(diploid) 422.827
CNS0095598Silvery flower (diploied) 143.424
CNS0095599Silvery flower (diploied) 239.079
CNS0095600Silvery flower (diploied) 333.335
CNS0095601Golden flower (diploid) 139.772
CNS0095602Golden flower (diploid) 234.407
CNS0095603Golden flower (diploid) 336.303
CNS0095604Slightly white alabastrum(tetraploid) 123.417
CNS0095605Slightly white alabastrum(tetraploid) 226.021
CNS0095606Slightly white alabastrum(tetraploid) 344.592
CNS0095607Whole white alabastrum(tetraploid) 115.586
CNS0095608Whole white alabastrum(tetraploid) 217.097
CNS0095609Whole white alabastrum(tetraploid) 330.240
CNS0095610Silvery flower (tetraploid) 150.512
CNS0095611Silvery flower (tetraploid) 257.030
CNS0095612Silvery flower (tetraploid) 327.585
CNS0095613Golden flower (tetraploid) 125.565
CNS0095614Golden flower (tetraploid) 237.199
CNS0095615Golden flower (tetraploid) 317.977
CRA001975CRR073297Stem 136.198
CRR073298Stem 235.639
CRR073299Stem 328.663
CRR073300Leaf 124.538
CRR073301Leaf 227.221
CRR073302Leaf 325.430
CRR073303Juvenile bud 124.474
CRR073304Juvenile bud 217.937
CRR073305Juvenile bud 326.010
CRR073306Third green 12.713
CRR073307Third green 21.929
CRR073308Third green 33.480
CRR073309Second white 16.212
CRR073310Second white 25.480
CRR073311Second white 34.830
CRR073312Silver flowering 12.347
CRR073313Silver flowering 22.965
CRR073314Silver flowering 33.252
CRR073315Gold flowering 184.811
CRR073316Gold flowering 2129.144
CRR073317Gold flowering 361.745
CRR073318Tawny withering 135.969
CRR073319Tawny withering 229.436
CRR073320Tawny withering 328.802