Detail information of GWHGAAZE016685


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009786330.10PREDICTED: serine/threonine-protein kinase/endoribonuclease IRE1a-like [Nicotiana sylvestris]
Swissprottr|Q93VJ2|IRE1B_ARATH0Endoribonuclease (Precursor)
trEMBLtr|A0A068UG80|A0A068UG80_COFCA0Coffea canephora DH200=94 genomic scaffold, scaffold_26 {ECO:0000313|EMBL:CDP07272.1}
TAIR10AT5G24360.20inositol requiring 1-1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene8099002280995265-
GWHAAZE00000004mRNA8099002280995265-
GWHAAZE00000004exon8099002280990472-
GWHAAZE00000004exon8099078680991032-
GWHAAZE00000004exon8099119080991362-
GWHAAZE00000004exon8099212780993604-
GWHAAZE00000004exon8099388980994123-
GWHAAZE00000004exon8099511780995265-
GWHAAZE00000004CDS8099511780995265-
GWHAAZE00000004CDS8099388980994123-
GWHAAZE00000004CDS8099212780993604-
GWHAAZE00000004CDS8099119080991362-
GWHAAZE00000004CDS8099078680991032-
GWHAAZE00000004CDS8099002280990472-
Transcript Sequence

Network for GWHGAAZE016685

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.26Pkinase4867737.80E-38
PF06479.13Ribonuc_2-5A7799051.90E-44
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyIRE1

KEGG pathway

KO Enzyme pathway mapID
K08852ERN1 Protein processing in endoplasmic reticulum map04141
Autophagy - animalmap04140
Apoptosismap04210

Gene Ontology

GO term OntologyName
GO:0006397biological_processmRNA processing
GO:0006468biological_processprotein phosphorylation
GO:0004540molecular_functionribonuclease activity
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf14.888
SRR3591706second leaf8.657
SRR3591707mature leaf8.336
SRR3591708Shoot apex13.724
SRR3591709Stem13.570
SRR3591710White floral bud11.262
SRR3591711White flower15.572
SRR3591712Green floral bud9.323
SRR3591713Yellow flower12.182
SRP173429 SRR8316895Juvenile bud stage 8.173
SRR8316896Juvenile bud stage 11.560
SRR8316897Juvenile bud stage 5.078
SRR8316894Third green stage 3.751
SRR8316900Third green stage 9.345
SRR8316901Third green stage 10.196
SRR8316898Complete white stage 4.674
SRR8316899Complete white stage 13.924
SRR8316903Complete white stage 9.317
SRR8316902Silver flowering stage6.027
SRR8316904Silver flowering stage9.549
SRR8316905Silver flowering stage4.888
SRR8316906Gold flowering stage 15.459
SRR8316907Gold flowering stage 11.528
SRR8316908Gold flowering stage 13.232
SRP132670SRR6706286Control6.243
SRR6706287Light intensity 50%5.258
SRR6706288Light intensity 20%5.435
CNP0000432CNS0095592Slightly white alabastrum(diploid) 18.641
CNS0095593Slightly white alabastrum(diploid) 29.753
CNS0095594Slightly white alabastrum(diploid) 37.169
CNS0095595Whole white alabastrum(diploid) 27.319
CNS0095596Whole white alabastrum(diploid) 36.018
CNS0095597Whole white alabastrum(diploid) 46.510
CNS0095598Silvery flower (diploied) 111.120
CNS0095599Silvery flower (diploied) 29.700
CNS0095600Silvery flower (diploied) 315.355
CNS0095601Golden flower (diploid) 111.170
CNS0095602Golden flower (diploid) 216.200
CNS0095603Golden flower (diploid) 315.152
CNS0095604Slightly white alabastrum(tetraploid) 18.005
CNS0095605Slightly white alabastrum(tetraploid) 26.710
CNS0095606Slightly white alabastrum(tetraploid) 314.894
CNS0095607Whole white alabastrum(tetraploid) 16.391
CNS0095608Whole white alabastrum(tetraploid) 25.266
CNS0095609Whole white alabastrum(tetraploid) 39.311
CNS0095610Silvery flower (tetraploid) 113.273
CNS0095611Silvery flower (tetraploid) 213.833
CNS0095612Silvery flower (tetraploid) 315.652
CNS0095613Golden flower (tetraploid) 17.611
CNS0095614Golden flower (tetraploid) 211.973
CNS0095615Golden flower (tetraploid) 315.246
CRA001975CRR073297Stem 18.494
CRR073298Stem 27.936
CRR073299Stem 35.874
CRR073300Leaf 18.981
CRR073301Leaf 26.440
CRR073302Leaf 35.685
CRR073303Juvenile bud 15.457
CRR073304Juvenile bud 23.578
CRR073305Juvenile bud 38.076
CRR073306Third green 13.208
CRR073307Third green 22.521
CRR073308Third green 32.842
CRR073309Second white 15.648
CRR073310Second white 26.207
CRR073311Second white 35.462
CRR073312Silver flowering 16.948
CRR073313Silver flowering 27.112
CRR073314Silver flowering 37.634
CRR073315Gold flowering 15.155
CRR073316Gold flowering 27.354
CRR073317Gold flowering 33.838
CRR073318Tawny withering 16.174
CRR073319Tawny withering 27.153
CRR073320Tawny withering 35.587