Detail information of GWHGAAZE016652


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCAN69111.17.9009E-106hypothetical protein VITISV_031837 [Vitis vinifera]
Swissprottr|Q96324|GSTFB_ARATH5E-56Glutathione S-transferase F11
trEMBLtr|A5AJY2|A5AJY2_VITVI3E-106Putative uncharacterized protein {ECO:0000313|EMBL:CAN69111.1}
TAIR10AT3G03190.18E-47glutathione S-transferase F11

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene8026328880265371+
GWHAAZE00000004mRNA8026328880265371+
GWHAAZE00000004exon8026328880263549+
GWHAAZE00000004exon8026424980264430+
GWHAAZE00000004exon8026473980264787+
GWHAAZE00000004exon8026489980265371+
GWHAAZE00000004CDS8026328880263549+
GWHAAZE00000004CDS8026424980264430+
GWHAAZE00000004CDS8026473980264787+
GWHAAZE00000004CDS8026489980265371+
Transcript Sequence

Network for GWHGAAZE016652

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02798.21GST_N991752.60E-12
PF00043.26GST_C2073023.80E-10
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00799GST, gst Metabolic pathways map01100
Glutathione metabolismmap00480
Metabolism of xenobiotics by cytochrome P450map00980
Drug metabolism - cytochrome P450map00982
Drug metabolism - other enzymesmap00983
Longevity regulating pathway - wormmap04212

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf81.566
SRR3591706second leaf26.507
SRR3591707mature leaf5.682
SRR3591708Shoot apex37.377
SRR3591709Stem43.819
SRR3591710White floral bud3.685
SRR3591711White flower3.415
SRR3591712Green floral bud13.278
SRR3591713Yellow flower1.014
SRP173429 SRR8316895Juvenile bud stage 13.930
SRR8316896Juvenile bud stage 12.797
SRR8316897Juvenile bud stage 7.884
SRR8316894Third green stage 7.414
SRR8316900Third green stage 6.329
SRR8316901Third green stage 12.621
SRR8316898Complete white stage 0.230
SRR8316899Complete white stage 3.813
SRR8316903Complete white stage 0.783
SRR8316902Silver flowering stage0.572
SRR8316904Silver flowering stage0.369
SRR8316905Silver flowering stage0.168
SRR8316906Gold flowering stage 0.700
SRR8316907Gold flowering stage 0.397
SRR8316908Gold flowering stage 0.304
SRP132670SRR6706286Control5.757
SRR6706287Light intensity 50%4.954
SRR6706288Light intensity 20%4.382
CNP0000432CNS0095592Slightly white alabastrum(diploid) 123.997
CNS0095593Slightly white alabastrum(diploid) 228.030
CNS0095594Slightly white alabastrum(diploid) 321.943
CNS0095595Whole white alabastrum(diploid) 27.846
CNS0095596Whole white alabastrum(diploid) 35.458
CNS0095597Whole white alabastrum(diploid) 43.624
CNS0095598Silvery flower (diploied) 14.800
CNS0095599Silvery flower (diploied) 24.239
CNS0095600Silvery flower (diploied) 30.915
CNS0095601Golden flower (diploid) 15.738
CNS0095602Golden flower (diploid) 22.382
CNS0095603Golden flower (diploid) 32.278
CNS0095604Slightly white alabastrum(tetraploid) 121.356
CNS0095605Slightly white alabastrum(tetraploid) 221.159
CNS0095606Slightly white alabastrum(tetraploid) 331.157
CNS0095607Whole white alabastrum(tetraploid) 12.710
CNS0095608Whole white alabastrum(tetraploid) 20.831
CNS0095609Whole white alabastrum(tetraploid) 32.909
CNS0095610Silvery flower (tetraploid) 10.711
CNS0095611Silvery flower (tetraploid) 21.052
CNS0095612Silvery flower (tetraploid) 30.766
CNS0095613Golden flower (tetraploid) 10.748
CNS0095614Golden flower (tetraploid) 20.911
CNS0095615Golden flower (tetraploid) 30.353
CRA001975CRR073297Stem 110.105
CRR073298Stem 214.515
CRR073299Stem 311.167
CRR073300Leaf 16.512
CRR073301Leaf 29.204
CRR073302Leaf 39.906
CRR073303Juvenile bud 11.328
CRR073304Juvenile bud 20.131
CRR073305Juvenile bud 32.530
CRR073306Third green 10.274
CRR073307Third green 20.306
CRR073308Third green 30.399
CRR073309Second white 10.057
CRR073310Second white 20.111
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.057
CRR073314Silver flowering 30.000
CRR073315Gold flowering 13.069
CRR073316Gold flowering 22.306
CRR073317Gold flowering 33.484
CRR073318Tawny withering 131.062
CRR073319Tawny withering 222.042
CRR073320Tawny withering 331.245