Detail information of GWHGAAZE016621


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002279699.10PREDICTED: uncharacterized protein LOC100247144 [Vitis vinifera]
trEMBLtr|F6H1M0|F6H1M0_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB46048.1}
TAIR10AT4G24200.14E-50Transcription elongation factor (TFIIS) family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene7982665679829550-
GWHAAZE00000004mRNA7982665679829550-
GWHAAZE00000004exon7982665679829550-
GWHAAZE00000004CDS7982665679829550-
Transcript Sequence

Network for GWHGAAZE016621

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0005634cellular_componentnucleus

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf6.184
SRR3591706second leaf6.349
SRR3591707mature leaf7.641
SRR3591708Shoot apex10.036
SRR3591709Stem9.159
SRR3591710White floral bud11.743
SRR3591711White flower16.935
SRR3591712Green floral bud9.996
SRR3591713Yellow flower14.961
SRP173429 SRR8316895Juvenile bud stage 7.011
SRR8316896Juvenile bud stage 7.973
SRR8316897Juvenile bud stage 4.720
SRR8316894Third green stage 4.025
SRR8316900Third green stage 7.600
SRR8316901Third green stage 9.425
SRR8316898Complete white stage 3.386
SRR8316899Complete white stage 10.906
SRR8316903Complete white stage 6.920
SRR8316902Silver flowering stage4.823
SRR8316904Silver flowering stage7.747
SRR8316905Silver flowering stage3.735
SRR8316906Gold flowering stage 14.264
SRR8316907Gold flowering stage 11.560
SRR8316908Gold flowering stage 14.317
SRP132670SRR6706286Control5.352
SRR6706287Light intensity 50%6.420
SRR6706288Light intensity 20%6.557
CNP0000432CNS0095592Slightly white alabastrum(diploid) 18.225
CNS0095593Slightly white alabastrum(diploid) 25.662
CNS0095594Slightly white alabastrum(diploid) 38.432
CNS0095595Whole white alabastrum(diploid) 27.021
CNS0095596Whole white alabastrum(diploid) 35.442
CNS0095597Whole white alabastrum(diploid) 45.742
CNS0095598Silvery flower (diploied) 18.402
CNS0095599Silvery flower (diploied) 25.990
CNS0095600Silvery flower (diploied) 312.698
CNS0095601Golden flower (diploid) 17.052
CNS0095602Golden flower (diploid) 214.187
CNS0095603Golden flower (diploid) 313.635
CNS0095604Slightly white alabastrum(tetraploid) 18.368
CNS0095605Slightly white alabastrum(tetraploid) 26.960
CNS0095606Slightly white alabastrum(tetraploid) 313.189
CNS0095607Whole white alabastrum(tetraploid) 15.119
CNS0095608Whole white alabastrum(tetraploid) 24.749
CNS0095609Whole white alabastrum(tetraploid) 38.871
CNS0095610Silvery flower (tetraploid) 114.203
CNS0095611Silvery flower (tetraploid) 212.717
CNS0095612Silvery flower (tetraploid) 310.693
CNS0095613Golden flower (tetraploid) 18.334
CNS0095614Golden flower (tetraploid) 213.231
CNS0095615Golden flower (tetraploid) 315.436
CRA001975CRR073297Stem 110.596
CRR073298Stem 210.211
CRR073299Stem 310.830
CRR073300Leaf 110.814
CRR073301Leaf 29.856
CRR073302Leaf 37.181
CRR073303Juvenile bud 19.350
CRR073304Juvenile bud 28.057
CRR073305Juvenile bud 39.672
CRR073306Third green 17.311
CRR073307Third green 24.574
CRR073308Third green 36.759
CRR073309Second white 16.652
CRR073310Second white 210.761
CRR073311Second white 311.346
CRR073312Silver flowering 110.752
CRR073313Silver flowering 28.701
CRR073314Silver flowering 37.865
CRR073315Gold flowering 14.946
CRR073316Gold flowering 28.759
CRR073317Gold flowering 34.075
CRR073318Tawny withering 19.171
CRR073319Tawny withering 213.345
CRR073320Tawny withering 38.434