Detail information of GWHGAAZE016604


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_004147834.11.15105E-58PREDICTED: auxin-induced protein 6B-like [Cucumis sativus]
Swissprottr|P33081|AX15A_SOYBN4E-16Auxin-induced protein 15A
trEMBLtr|A0A067KXE4|A0A067KXE4_JATCU1E-58Uncharacterized protein {ECO:0000313|EMBL:KDP36945.1}
TAIR10AT1G75590.12E-37SAUR-like auxin-responsive protein family

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene7952682779527204+
GWHAAZE00000004mRNA7952682779527204+
GWHAAZE00000004exon7952682779527204+
GWHAAZE00000004CDS7952682779527204+
Transcript Sequence

Network for GWHGAAZE016604

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02519.15Auxin_inducible12833.40E-28
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14488SAUR Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0009733biological_processresponse to auxin

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf32.115
SRR3591706second leaf2.165
SRR3591707mature leaf1.713
SRR3591708Shoot apex13.426
SRR3591709Stem25.748
SRR3591710White floral bud12.051
SRR3591711White flower5.744
SRR3591712Green floral bud3.310
SRR3591713Yellow flower2.066
SRP173429 SRR8316895Juvenile bud stage 4.363
SRR8316896Juvenile bud stage 6.235
SRR8316897Juvenile bud stage 2.550
SRR8316894Third green stage 1.156
SRR8316900Third green stage 3.289
SRR8316901Third green stage 3.861
SRR8316898Complete white stage 3.595
SRR8316899Complete white stage 4.627
SRR8316903Complete white stage 1.716
SRR8316902Silver flowering stage1.162
SRR8316904Silver flowering stage0.988
SRR8316905Silver flowering stage0.839
SRR8316906Gold flowering stage 2.975
SRR8316907Gold flowering stage 0.816
SRR8316908Gold flowering stage 1.693
SRP132670SRR6706286Control0.804
SRR6706287Light intensity 50%1.673
SRR6706288Light intensity 20%1.038
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.043
CNS0095593Slightly white alabastrum(diploid) 213.356
CNS0095594Slightly white alabastrum(diploid) 39.572
CNS0095595Whole white alabastrum(diploid) 24.540
CNS0095596Whole white alabastrum(diploid) 33.980
CNS0095597Whole white alabastrum(diploid) 43.884
CNS0095598Silvery flower (diploied) 112.530
CNS0095599Silvery flower (diploied) 29.521
CNS0095600Silvery flower (diploied) 33.419
CNS0095601Golden flower (diploid) 17.529
CNS0095602Golden flower (diploid) 22.022
CNS0095603Golden flower (diploid) 32.423
CNS0095604Slightly white alabastrum(tetraploid) 12.813
CNS0095605Slightly white alabastrum(tetraploid) 23.472
CNS0095606Slightly white alabastrum(tetraploid) 33.073
CNS0095607Whole white alabastrum(tetraploid) 14.264
CNS0095608Whole white alabastrum(tetraploid) 21.342
CNS0095609Whole white alabastrum(tetraploid) 30.357
CNS0095610Silvery flower (tetraploid) 11.213
CNS0095611Silvery flower (tetraploid) 21.837
CNS0095612Silvery flower (tetraploid) 36.107
CNS0095613Golden flower (tetraploid) 10.100
CNS0095614Golden flower (tetraploid) 20.310
CNS0095615Golden flower (tetraploid) 30.733
CRA001975CRR073297Stem 18.403
CRR073298Stem 212.590
CRR073299Stem 314.074
CRR073300Leaf 112.277
CRR073301Leaf 221.342
CRR073302Leaf 312.348
CRR073303Juvenile bud 116.436
CRR073304Juvenile bud 218.652
CRR073305Juvenile bud 321.930
CRR073306Third green 135.599
CRR073307Third green 229.370
CRR073308Third green 332.971
CRR073309Second white 17.552
CRR073310Second white 25.977
CRR073311Second white 34.086
CRR073312Silver flowering 16.233
CRR073313Silver flowering 28.002
CRR073314Silver flowering 36.169
CRR073315Gold flowering 11.818
CRR073316Gold flowering 22.318
CRR073317Gold flowering 31.987
CRR073318Tawny withering 140.177
CRR073319Tawny withering 218.478
CRR073320Tawny withering 334.636