Detail information of GWHGAAZE016539


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011074516.10PREDICTED: UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase 2-like [Sesamum indicum]
trEMBLtr|A0A061FCV2|A0A061FCV2_THECC0Nucleotide-diphospho-sugar transferase family protein {ECO:0000313|EMBL:EOY14703.1}
TAIR10AT1G19360.10Nucleotide-diphospho-sugar transferase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene7837909978381351-
GWHAAZE00000004mRNA7837909978381351-
GWHAAZE00000004exon7838104378381351-
GWHAAZE00000004exon7837909978380214-
GWHAAZE00000004five_prime_UTR7838121478381351-
GWHAAZE00000004CDS7838104378381213-
GWHAAZE00000004CDS7837909978380214-
Transcript Sequence

Network for GWHGAAZE016539

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03407.17Nucleotid_trans1844042.50E-53
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K20783RRA Other types of O-glycan biosynthesis map00514

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf75.808
SRR3591706second leaf26.035
SRR3591707mature leaf24.284
SRR3591708Shoot apex36.548
SRR3591709Stem58.756
SRR3591710White floral bud51.792
SRR3591711White flower64.943
SRR3591712Green floral bud60.132
SRR3591713Yellow flower41.143
SRP173429 SRR8316895Juvenile bud stage 48.710
SRR8316896Juvenile bud stage 60.640
SRR8316897Juvenile bud stage 35.001
SRR8316894Third green stage 22.754
SRR8316900Third green stage 75.193
SRR8316901Third green stage 80.027
SRR8316898Complete white stage 33.025
SRR8316899Complete white stage 121.231
SRR8316903Complete white stage 43.082
SRR8316902Silver flowering stage35.726
SRR8316904Silver flowering stage46.823
SRR8316905Silver flowering stage24.625
SRR8316906Gold flowering stage 71.669
SRR8316907Gold flowering stage 76.383
SRR8316908Gold flowering stage 84.903
SRP132670SRR6706286Control72.258
SRR6706287Light intensity 50%71.773
SRR6706288Light intensity 20%81.685
CNP0000432CNS0095592Slightly white alabastrum(diploid) 156.157
CNS0095593Slightly white alabastrum(diploid) 271.029
CNS0095594Slightly white alabastrum(diploid) 359.025
CNS0095595Whole white alabastrum(diploid) 256.366
CNS0095596Whole white alabastrum(diploid) 355.723
CNS0095597Whole white alabastrum(diploid) 450.643
CNS0095598Silvery flower (diploied) 150.323
CNS0095599Silvery flower (diploied) 250.673
CNS0095600Silvery flower (diploied) 388.083
CNS0095601Golden flower (diploid) 138.674
CNS0095602Golden flower (diploid) 280.401
CNS0095603Golden flower (diploid) 382.750
CNS0095604Slightly white alabastrum(tetraploid) 145.319
CNS0095605Slightly white alabastrum(tetraploid) 239.366
CNS0095606Slightly white alabastrum(tetraploid) 368.098
CNS0095607Whole white alabastrum(tetraploid) 133.095
CNS0095608Whole white alabastrum(tetraploid) 230.664
CNS0095609Whole white alabastrum(tetraploid) 361.134
CNS0095610Silvery flower (tetraploid) 168.903
CNS0095611Silvery flower (tetraploid) 257.773
CNS0095612Silvery flower (tetraploid) 348.275
CNS0095613Golden flower (tetraploid) 131.176
CNS0095614Golden flower (tetraploid) 256.763
CNS0095615Golden flower (tetraploid) 351.812
CRA001975CRR073297Stem 161.068
CRR073298Stem 262.495
CRR073299Stem 383.102
CRR073300Leaf 181.398
CRR073301Leaf 299.542
CRR073302Leaf 395.116
CRR073303Juvenile bud 1106.059
CRR073304Juvenile bud 299.801
CRR073305Juvenile bud 3134.321
CRR073306Third green 144.401
CRR073307Third green 249.330
CRR073308Third green 348.541
CRR073309Second white 192.927
CRR073310Second white 252.975
CRR073311Second white 357.009
CRR073312Silver flowering 172.757
CRR073313Silver flowering 276.632
CRR073314Silver flowering 356.119
CRR073315Gold flowering 140.214
CRR073316Gold flowering 256.565
CRR073317Gold flowering 357.740
CRR073318Tawny withering 197.845
CRR073319Tawny withering 289.962
CRR073320Tawny withering 380.896