Gene detail

Detail information of GWHGAAZE016509

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_007136644.1	7.5785E-169	hypothetical protein PHAVU_009G061600g [Phaseolus vulgaris]
Swissprot	tr\|Q9SZ46\|C82C4_ARATH	4E-145	Cytochrome P450 82C4
trEMBL	tr\|V7AVM1\|V7AVM1_PHAVU	3E-169	Uncharacterized protein {ECO:0000313\|EMBL:ESW08638.1}
TAIR10	AT4G31940.1	4E-105	cytochrome P450, family 82, subfamily C, polypeptide 4

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000004	gene	77910283	77913060	+
GWHAAZE00000004	mRNA	77910283	77913060	+
GWHAAZE00000004	exon	77910283	77911239	+
GWHAAZE00000004	exon	77912830	77913060	+
GWHAAZE00000004	CDS	77910283	77911239	+
GWHAAZE00000004	CDS	77912830	77913060	+

Transcript Sequence
>GWHTAAZE016529 ATGGACTCTTCTCTTCTTGTTTTGGTATGTGTTTCTTTAATCCTTCTCTGTTTAGCTTTTTTTGGAAGGACGAAAAAAACTAAAACTAGCAATTACGCTAGAATAGAAGCTCCAAAGCCGGCAGGTGCGTGGCCAATAATTGGTCACCTTCACTTACTAAGTGGAGGTCACCAACTGCTCTATAGGACGTTGGGCCATATGGCAGACAGATATGGCCCAGCATTCAACATCTGCCTCGGGAGTCGCCGAGCTTTTGTTGTTAGCAGTTGGGAAGTAGCAAAAGAATGCTTCACTGCTAATGACAAAGCATTGGCGAGTCGCCCTCTGACAGTGGCGGCAAAGCACATGGGCTACAACTATGCAGTATTTGGCTTTGCCCCCTACAGCTCGTTCTGGCGTGAGATGCGAAAGATTGCCACCCTCGAGCTCCTCTCGAACCGCCGCCTCGAGATGCTCAAACACGTCCGGGAATCAGAGGTTGATATGGGGATCAAAGGCTTGTATAAGTCGTGGCTCGAAAATGGCTCAACTCCGGTGGTGGTCGAGCTCAAGAAATGGCTTGAAGAGCTGACGTTGAATGTGGTGGTTAGGATGGTGGCGGGGAAGAGGTATTTTGGGGCAGGTGCAGCAGCGAGTGATGCGGATGAGGCAATGAGGTGTCACAAGGCGATTGGTCAATTTTTTCATTTGATTGGGATTTTTGTGGTGTCGGATGCGATTCCTTTTTTGTGGTGGTTGGATTTGCAGGGGCATGAGAAGGCGATGAAGAGGACGGCAAAGGAATTGGACTACGTGCTCGAAGGGTGGTTGGAGGAGCACCGGCGGAGGAGGGCGTCTGGAGAGGTGAAGGGGGAGGGCGAACAAGATTTTATCGATGTAATGTTGGCTCTTGAGGAAGAAGGAAATCTTTCAAATTTTCAGCATGATTCAAACACTGGCATCAAGTCTACTTGCCTGCAGTTTGAGCTGATGCCGTTTGGCTCTGGGAGACGGTCTTGTCCTGGCGTGTCGTTTGCGCTCCAGCTTCTCCACCTGACGTTCGCTCGCCTTCTACATGCATTTGATTTGGCTACGCCGTTGGGTGAGCCAGTTGATATGAGCGAGAGCCCTGGTCTAACTATTCCCAAGGCTACGCCGTTAGAGGTCCTCCTTTCGCCTCGGCTTTCTGCCAAACTCTATGAGTGTTGA

Network for GWHGAAZE016509

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	38	307	3.50E-21
PF00067.23	p450	315	376	8.90E-10

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.102
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	1.479
	SRR3591711	White flower	0.075
	SRR3591712	Green floral bud	2.697
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	0.000
	SRR8316896	Juvenile bud stage	0.242
	SRR8316897	Juvenile bud stage	0.583
	SRR8316894	Third green stage	0.284
	SRR8316900	Third green stage	2.764
	SRR8316901	Third green stage	2.158
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	0.000
	SRR8316903	Complete white stage	0.020
	SRR8316902	Silver flowering stage	0.000
	SRR8316904	Silver flowering stage	0.174
	SRR8316905	Silver flowering stage	0.094
	SRR8316906	Gold flowering stage	0.000
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.000
SRP132670	SRR6706286	Control	2.595
	SRR6706287	Light intensity 50%	2.476
	SRR6706288	Light intensity 20%	1.413
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	1.469
	CNS0095593	Slightly white alabastrum(diploid) 2	0.984
	CNS0095594	Slightly white alabastrum(diploid) 3	1.734
	CNS0095595	Whole white alabastrum(diploid) 2	6.206
	CNS0095596	Whole white alabastrum(diploid) 3	9.601
	CNS0095597	Whole white alabastrum(diploid) 4	8.201
	CNS0095598	Silvery flower (diploied) 1	0.015
	CNS0095599	Silvery flower (diploied) 2	0.345
	CNS0095600	Silvery flower (diploied) 3	0.045
	CNS0095601	Golden flower (diploid) 1	0.102
	CNS0095602	Golden flower (diploid) 2	0.117
	CNS0095603	Golden flower (diploid) 3	0.047
	CNS0095604	Slightly white alabastrum(tetraploid) 1	1.773
	CNS0095605	Slightly white alabastrum(tetraploid) 2	1.567
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.000
	CNS0095607	Whole white alabastrum(tetraploid) 1	5.686
	CNS0095608	Whole white alabastrum(tetraploid) 2	5.717
	CNS0095609	Whole white alabastrum(tetraploid) 3	2.615
	CNS0095610	Silvery flower (tetraploid) 1	0.182
	CNS0095611	Silvery flower (tetraploid) 2	0.207
	CNS0095612	Silvery flower (tetraploid) 3	0.755
	CNS0095613	Golden flower (tetraploid) 1	0.034
	CNS0095614	Golden flower (tetraploid) 2	0.000
	CNS0095615	Golden flower (tetraploid) 3	0.259
CRA001975	CRR073297	Stem 1	0.051
	CRR073298	Stem 2	0.066
	CRR073299	Stem 3	0.065
	CRR073300	Leaf 1	1.762
	CRR073301	Leaf 2	1.061
	CRR073302	Leaf 3	0.640
	CRR073303	Juvenile bud 1	0.989
	CRR073304	Juvenile bud 2	1.186
	CRR073305	Juvenile bud 3	0.000
	CRR073306	Third green 1	0.252
	CRR073307	Third green 2	0.291
	CRR073308	Third green 3	0.423
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.048
	CRR073312	Silver flowering 1	0.407
	CRR073313	Silver flowering 2	0.118
	CRR073314	Silver flowering 3	0.056
	CRR073315	Gold flowering 1	0.018
	CRR073316	Gold flowering 2	0.088
	CRR073317	Gold flowering 3	0.257
	CRR073318	Tawny withering 1	0.332
	CRR073319	Tawny withering 2	0.149
	CRR073320	Tawny withering 3	0.482