Detail information of GWHGAAZE016167


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010937051.11.72757E-35PREDICTED: 16.9 kDa class I heat shock protein 1-like [Elaeis guineensis]
Swissprottr|P13853|HS17C_ARATH7E-3017.6 kDa class I heat shock protein 3
trEMBLtr|B9SMA2|B9SMA2_RICCO2E-35Heat-shock protein, putative {ECO:0000313|EMBL:EEF35284.1}
TAIR10AT5G59720.13E-19heat shock protein 18.2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene7062556670625844-
GWHAAZE00000004mRNA7062556670625844-
GWHAAZE00000004exon7062556670625844-
GWHAAZE00000004CDS7062556670625844-
Transcript Sequence

Network for GWHGAAZE016167

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00011.22HSP201911.30E-23
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13993HSP20 Protein processing in endoplasmic reticulum map04141

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.174
SRR3591709Stem0.561
SRR3591710White floral bud0.000
SRR3591711White flower0.021
SRR3591712Green floral bud0.125
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 2.771
SRR8316896Juvenile bud stage 2.568
SRR8316897Juvenile bud stage 1.905
SRR8316894Third green stage 0.985
SRR8316900Third green stage 0.158
SRR8316901Third green stage 1.575
SRR8316898Complete white stage 0.146
SRR8316899Complete white stage 0.463
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.532
SRR8316904Silver flowering stage0.131
SRR8316905Silver flowering stage0.092
SRR8316906Gold flowering stage 0.326
SRR8316907Gold flowering stage 0.882
SRR8316908Gold flowering stage 0.948
SRP132670SRR6706286Control0.165
SRR6706287Light intensity 50%0.677
SRR6706288Light intensity 20%0.149
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.033
CNS0095593Slightly white alabastrum(diploid) 20.355
CNS0095594Slightly white alabastrum(diploid) 31.152
CNS0095595Whole white alabastrum(diploid) 20.538
CNS0095596Whole white alabastrum(diploid) 30.000
CNS0095597Whole white alabastrum(diploid) 40.907
CNS0095598Silvery flower (diploied) 10.960
CNS0095599Silvery flower (diploied) 20.701
CNS0095600Silvery flower (diploied) 30.208
CNS0095601Golden flower (diploid) 10.294
CNS0095602Golden flower (diploid) 20.798
CNS0095603Golden flower (diploid) 30.378
CNS0095604Slightly white alabastrum(tetraploid) 10.000
CNS0095605Slightly white alabastrum(tetraploid) 20.385
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.041
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (tetraploid) 10.144
CNS0095611Silvery flower (tetraploid) 20.000
CNS0095612Silvery flower (tetraploid) 30.119
CNS0095613Golden flower (tetraploid) 10.031
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 10.000
CRR073298Stem 20.088
CRR073299Stem 30.442
CRR073300Leaf 11.622
CRR073301Leaf 21.844
CRR073302Leaf 30.000
CRR073303Juvenile bud 10.000
CRR073304Juvenile bud 20.060
CRR073305Juvenile bud 30.148
CRR073306Third green 10.240
CRR073307Third green 20.000
CRR073308Third green 30.081
CRR073309Second white 10.000
CRR073310Second white 20.133
CRR073311Second white 30.300
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.093
CRR073317Gold flowering 30.182
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.594
CRR073320Tawny withering 30.151