Detail information of GWHGAAZE016159


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007207158.10hypothetical protein PRUPE_ppa024477mg [Prunus persica]
Swissprottr|P09189|HSP7C_PETHY0Heat shock cognate 70 kDa protein
trEMBLtr|M5W3N4|M5W3N4_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ08357.1}
TAIR10AT3G12580.10heat shock protein 70

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene7048409770486957-
GWHAAZE00000004mRNA7048409770486957-
GWHAAZE00000004exon7048409770485262-
GWHAAZE00000004exon7048536470485417-
GWHAAZE00000004exon7048594370486216-
GWHAAZE00000004exon7048667570486957-
GWHAAZE00000004five_prime_UTR7048685870486957-
GWHAAZE00000004CDS7048667570486857-
GWHAAZE00000004CDS7048594370486216-
GWHAAZE00000004CDS7048536470485417-
GWHAAZE00000004CDS7048409770485262-
Transcript Sequence

Network for GWHGAAZE016159

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00012.21HSP701715484.50E-103
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03283HSPA1s Spliceosome map03040
Protein processing in endoplasmic reticulummap04141
MAPK signaling pathwaymap04010
Endocytosismap04144
Antigen processing and presentationmap04612
Estrogen signaling pathwaymap04915
Longevity regulating pathway - multiple speciesmap04213

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf157.687
SRR3591706second leaf40.920
SRR3591707mature leaf18.622
SRR3591708Shoot apex65.809
SRR3591709Stem101.779
SRR3591710White floral bud53.772
SRR3591711White flower52.517
SRR3591712Green floral bud64.415
SRR3591713Yellow flower3.128
SRP173429 SRR8316895Juvenile bud stage 147.070
SRR8316896Juvenile bud stage 150.701
SRR8316897Juvenile bud stage 113.848
SRR8316894Third green stage 62.382
SRR8316900Third green stage 106.693
SRR8316901Third green stage 140.444
SRR8316898Complete white stage 3.533
SRR8316899Complete white stage 166.792
SRR8316903Complete white stage 9.320
SRR8316902Silver flowering stage3.016
SRR8316904Silver flowering stage0.718
SRR8316905Silver flowering stage0.305
SRR8316906Gold flowering stage 0.868
SRR8316907Gold flowering stage 1.461
SRR8316908Gold flowering stage 1.131
SRP132670SRR6706286Control47.095
SRR6706287Light intensity 50%56.249
SRR6706288Light intensity 20%48.617
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1135.839
CNS0095593Slightly white alabastrum(diploid) 2181.025
CNS0095594Slightly white alabastrum(diploid) 3129.270
CNS0095595Whole white alabastrum(diploid) 2109.078
CNS0095596Whole white alabastrum(diploid) 332.151
CNS0095597Whole white alabastrum(diploid) 478.059
CNS0095598Silvery flower (diploied) 1214.949
CNS0095599Silvery flower (diploied) 2182.439
CNS0095600Silvery flower (diploied) 368.063
CNS0095601Golden flower (diploid) 1203.125
CNS0095602Golden flower (diploid) 2115.097
CNS0095603Golden flower (diploid) 3122.711
CNS0095604Slightly white alabastrum(tetraploid) 133.593
CNS0095605Slightly white alabastrum(tetraploid) 230.069
CNS0095606Slightly white alabastrum(tetraploid) 381.485
CNS0095607Whole white alabastrum(tetraploid) 124.418
CNS0095608Whole white alabastrum(tetraploid) 214.287
CNS0095609Whole white alabastrum(tetraploid) 327.897
CNS0095610Silvery flower (tetraploid) 15.818
CNS0095611Silvery flower (tetraploid) 215.115
CNS0095612Silvery flower (tetraploid) 312.151
CNS0095613Golden flower (tetraploid) 11.092
CNS0095614Golden flower (tetraploid) 26.549
CNS0095615Golden flower (tetraploid) 30.976
CRA001975CRR073297Stem 160.940
CRR073298Stem 267.954
CRR073299Stem 358.990
CRR073300Leaf 1146.600
CRR073301Leaf 2207.956
CRR073302Leaf 379.952
CRR073303Juvenile bud 195.962
CRR073304Juvenile bud 274.394
CRR073305Juvenile bud 3217.549
CRR073306Third green 15.766
CRR073307Third green 25.183
CRR073308Third green 36.988
CRR073309Second white 10.522
CRR073310Second white 20.492
CRR073311Second white 30.308
CRR073312Silver flowering 10.815
CRR073313Silver flowering 21.057
CRR073314Silver flowering 30.413
CRR073315Gold flowering 141.701
CRR073316Gold flowering 256.033
CRR073317Gold flowering 339.327
CRR073318Tawny withering 176.595
CRR073319Tawny withering 274.519
CRR073320Tawny withering 3117.422