Detail information of GWHGAAZE016158


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDO72893.14.35066E-75hypothetical protein CISIN_1g036208mg, partial [Citrus sinensis]
Swissprottr|P09189|HSP7C_PETHY7E-72Heat shock cognate 70 kDa protein
trEMBLtr|M0TS87|M0TS87_MUSAM2E-76Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P20840_001}
TAIR10AT5G02500.29E-61heat shock cognate protein 70-1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene7048119870482821-
GWHAAZE00000004mRNA7048119870482821-
GWHAAZE00000004exon7048232070482821-
GWHAAZE00000004exon7048119870481208-
GWHAAZE00000004CDS7048232070482821-
GWHAAZE00000004CDS7048119870481208-
Transcript Sequence

Network for GWHGAAZE016158

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00012.21HSP70111682.60E-62
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03283HSPA1s Spliceosome map03040
Protein processing in endoplasmic reticulummap04141
MAPK signaling pathwaymap04010
Endocytosismap04144
Antigen processing and presentationmap04612
Estrogen signaling pathwaymap04915
Longevity regulating pathway - multiple speciesmap04213

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.367
SRR3591706second leaf0.518
SRR3591707mature leaf2.207
SRR3591708Shoot apex1.382
SRR3591709Stem1.350
SRR3591710White floral bud1.495
SRR3591711White flower1.942
SRR3591712Green floral bud1.130
SRR3591713Yellow flower1.445
SRP173429 SRR8316895Juvenile bud stage 0.824
SRR8316896Juvenile bud stage 1.802
SRR8316897Juvenile bud stage 0.096
SRR8316894Third green stage 1.199
SRR8316900Third green stage 1.532
SRR8316901Third green stage 2.162
SRR8316898Complete white stage 0.671
SRR8316899Complete white stage 2.944
SRR8316903Complete white stage 1.882
SRR8316902Silver flowering stage1.514
SRR8316904Silver flowering stage1.581
SRR8316905Silver flowering stage1.263
SRR8316906Gold flowering stage 2.730
SRR8316907Gold flowering stage 1.766
SRR8316908Gold flowering stage 4.696
SRP132670SRR6706286Control4.614
SRR6706287Light intensity 50%2.546
SRR6706288Light intensity 20%3.263
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.757
CNS0095593Slightly white alabastrum(diploid) 20.335
CNS0095594Slightly white alabastrum(diploid) 31.064
CNS0095595Whole white alabastrum(diploid) 20.871
CNS0095596Whole white alabastrum(diploid) 30.650
CNS0095597Whole white alabastrum(diploid) 40.853
CNS0095598Silvery flower (diploied) 10.893
CNS0095599Silvery flower (diploied) 20.399
CNS0095600Silvery flower (diploied) 31.926
CNS0095601Golden flower (diploid) 11.511
CNS0095602Golden flower (diploid) 23.370
CNS0095603Golden flower (diploid) 34.102
CNS0095604Slightly white alabastrum(tetraploid) 10.443
CNS0095605Slightly white alabastrum(tetraploid) 20.908
CNS0095606Slightly white alabastrum(tetraploid) 31.833
CNS0095607Whole white alabastrum(tetraploid) 10.475
CNS0095608Whole white alabastrum(tetraploid) 20.220
CNS0095609Whole white alabastrum(tetraploid) 31.713
CNS0095610Silvery flower (tetraploid) 12.394
CNS0095611Silvery flower (tetraploid) 22.186
CNS0095612Silvery flower (tetraploid) 31.722
CNS0095613Golden flower (tetraploid) 10.986
CNS0095614Golden flower (tetraploid) 22.781
CNS0095615Golden flower (tetraploid) 32.575
CRA001975CRR073297Stem 11.421
CRR073298Stem 21.216
CRR073299Stem 31.862
CRR073300Leaf 12.347
CRR073301Leaf 20.820
CRR073302Leaf 32.213
CRR073303Juvenile bud 10.704
CRR073304Juvenile bud 20.886
CRR073305Juvenile bud 31.422
CRR073306Third green 10.969
CRR073307Third green 20.310
CRR073308Third green 30.720
CRR073309Second white 10.752
CRR073310Second white 21.263
CRR073311Second white 31.735
CRR073312Silver flowering 13.274
CRR073313Silver flowering 21.666
CRR073314Silver flowering 31.687
CRR073315Gold flowering 11.126
CRR073316Gold flowering 25.497
CRR073317Gold flowering 35.823
CRR073318Tawny withering 13.165
CRR073319Tawny withering 20.742
CRR073320Tawny withering 31.347