Gene detail

Detail information of GWHGAAZE016116

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_006434447.1	0	hypothetical protein CICLE_v10001734mg [Citrus clementina]
Swissprot	tr\|P46276\|F16P2_SOLTU	0	Fructose-1,6-bisphosphatase, cytosolic
trEMBL	tr\|V4T3G2\|V4T3G2_9ROSI	0	Uncharacterized protein {ECO:0000313\|EMBL:ESR47687.1}
TAIR10	AT1G43670.1	1E-175	Inositol monophosphatase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000004	gene	69565026	69571587	+
GWHAAZE00000004	mRNA	69565026	69571587	+
GWHAAZE00000004	exon	69565026	69565184	+
GWHAAZE00000004	exon	69566137	69566178	+
GWHAAZE00000004	exon	69567310	69567384	+
GWHAAZE00000004	exon	69567477	69567538	+
GWHAAZE00000004	exon	69568605	69568671	+
GWHAAZE00000004	exon	69568794	69568907	+
GWHAAZE00000004	exon	69569148	69569234	+
GWHAAZE00000004	exon	69569582	69569652	+
GWHAAZE00000004	exon	69569736	69569801	+
GWHAAZE00000004	exon	69570009	69570095	+
GWHAAZE00000004	exon	69570195	69570270	+
GWHAAZE00000004	exon	69571477	69571587	+
GWHAAZE00000004	CDS	69565026	69565184	+
GWHAAZE00000004	CDS	69566137	69566178	+
GWHAAZE00000004	CDS	69567310	69567384	+
GWHAAZE00000004	CDS	69567477	69567538	+
GWHAAZE00000004	CDS	69568605	69568671	+
GWHAAZE00000004	CDS	69568794	69568907	+
GWHAAZE00000004	CDS	69569148	69569234	+
GWHAAZE00000004	CDS	69569582	69569652	+
GWHAAZE00000004	CDS	69569736	69569801	+
GWHAAZE00000004	CDS	69570009	69570095	+
GWHAAZE00000004	CDS	69570195	69570270	+
GWHAAZE00000004	CDS	69571477	69571587	+

Transcript Sequence
>GWHTAAZE016136 ATGGATCATGCTGCCGATGCTCACCGGACCGATTTGATGACTATCACTCGCTTTGTGCTTAACGAACAGTCCAAACACCCCGAATCCCGTGGGGATTTTAGTATTTTGCTTAGCCACATTGTTCTCGGTTGCAAATTCGTATGTTCTGCTGTTAACAAGGCTGGATTGGCAAAGCTCATTGGACTCGCTGGTGAGACCAATGGCGAAGAGCAAAAGAAACTGGATGTGCTTTCAAATGAAGTATTTGTCAAGGCTTTGGTCAGCAGCGGTCGAACATGCATTCTTGTTTCCGAGGAGGATGAAGAGGCCATATTTGTGGAGCCGTCTAAGCGTGGAAGGTATTGCGTTGTTTTTGATCCATTGGATGGATCCTCCAACATTGACTGTGGCGTTTCCATTGGGACTATCTTTGGGATTTATTCGATGAAAGATGATGGCGAACCATCTTTAGATGAGGTGTTGCAACCTGGGGAGAATATGTTAGCTGCTGGCTATTGCATGTATGGAAGCTCTTGCACGCTTGTATTGAGCACTGGATCTGGTGTCAATGGGTTTACCCTTGATCCATCTCTAGGGGAGTTCATTCTCACTCATGCAGACATTAAGATTCCAAAGAAAGGAAAGATTTACTCGGTGAATGAAGGAAATGCCAAGAATTGGGATCGCCCAACAGCGACGTATGTGGAAAATTGCAAGTTCCCTAAAGATGGGTCATCACCAAAATCTCTAAGATACATTGGAAGCATGGTAGCTGATGTCCATCGCACATTACTTTATGGGGGTGTCTTTCTGTACCCTGCCGATCAGAAGAGCCCCAGTGGAAAGCTTCGGGTTCTCTACGAAGTCTTCCCAATGTCTTTCTTGATGGAACAAGCCGGTGGTCAGTCATTTACTGGCAAGCAACGGGCACTTGACTTGGTTCCAAAGAAGATACACGAGAGATCTCCAATATTTCTTGGTAGCTATGACGATGTTGAGGAAATCAAAGCACTCTATGCTGCAGAAGATAAAAAGTAA

Network for GWHGAAZE016116

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00316.21	FBPase	13	198	1.00E-77
PF18913.1	FBPase_C	203	332	4.80E-60

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K03841	FBP, fbp	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Microbial metabolism in diverse environments	map01120
		Carbon metabolism	map01200
		Glycolysis / Gluconeogenesis	map00010
		Pentose phosphate pathway	map00030
		Fructose and mannose metabolism	map00051
		Carbon fixation in photosynthetic organisms	map00710
		Methane metabolism	map00680
		AMPK signaling pathway	map04152
		Insulin signaling pathway	map04910
		Glucagon signaling pathway	map04922

Gene Ontology

GO term	Ontology	Name
GO:0005975	biological_process	carbohydrate metabolic process
GO:0042132	molecular_function	fructose 1,6-bisphosphate 1-phosphatase activity
GO:0016791	molecular_function	phosphatase activity
GO:0042578	molecular_function	phosphoric ester hydrolase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	37.462
	SRR3591706	second leaf	13.442
	SRR3591707	mature leaf	8.929
	SRR3591708	Shoot apex	31.790
	SRR3591709	Stem	28.316
	SRR3591710	White floral bud	49.385
	SRR3591711	White flower	40.796
	SRR3591712	Green floral bud	39.704
	SRR3591713	Yellow flower	137.091
SRP173429	SRR8316895	Juvenile bud stage	54.733
	SRR8316896	Juvenile bud stage	81.860
	SRR8316897	Juvenile bud stage	48.287
	SRR8316894	Third green stage	24.211
	SRR8316900	Third green stage	53.202
	SRR8316901	Third green stage	64.405
	SRR8316898	Complete white stage	27.833
	SRR8316899	Complete white stage	31.205
	SRR8316903	Complete white stage	40.037
	SRR8316902	Silver flowering stage	17.192
	SRR8316904	Silver flowering stage	21.149
	SRR8316905	Silver flowering stage	10.168
	SRR8316906	Gold flowering stage	28.250
	SRR8316907	Gold flowering stage	24.445
	SRR8316908	Gold flowering stage	19.849
SRP132670	SRR6706286	Control	81.447
	SRR6706287	Light intensity 50%	70.573
	SRR6706288	Light intensity 20%	62.221
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	31.441
	CNS0095593	Slightly white alabastrum(diploid) 2	23.999
	CNS0095594	Slightly white alabastrum(diploid) 3	46.320
	CNS0095595	Whole white alabastrum(diploid) 2	21.539
	CNS0095596	Whole white alabastrum(diploid) 3	22.462
	CNS0095597	Whole white alabastrum(diploid) 4	21.579
	CNS0095598	Silvery flower (diploied) 1	42.033
	CNS0095599	Silvery flower (diploied) 2	31.166
	CNS0095600	Silvery flower (diploied) 3	65.251
	CNS0095601	Golden flower (diploid) 1	52.291
	CNS0095602	Golden flower (diploid) 2	75.623
	CNS0095603	Golden flower (diploid) 3	71.693
	CNS0095604	Slightly white alabastrum(tetraploid) 1	21.921
	CNS0095605	Slightly white alabastrum(tetraploid) 2	26.832
	CNS0095606	Slightly white alabastrum(tetraploid) 3	17.540
	CNS0095607	Whole white alabastrum(tetraploid) 1	21.535
	CNS0095608	Whole white alabastrum(tetraploid) 2	16.769
	CNS0095609	Whole white alabastrum(tetraploid) 3	44.475
	CNS0095610	Silvery flower (tetraploid) 1	54.654
	CNS0095611	Silvery flower (tetraploid) 2	69.125
	CNS0095612	Silvery flower (tetraploid) 3	36.995
	CNS0095613	Golden flower (tetraploid) 1	70.470
	CNS0095614	Golden flower (tetraploid) 2	98.880
	CNS0095615	Golden flower (tetraploid) 3	605.045
CRA001975	CRR073297	Stem 1	69.062
	CRR073298	Stem 2	62.350
	CRR073299	Stem 3	78.615
	CRR073300	Leaf 1	25.271
	CRR073301	Leaf 2	33.891
	CRR073302	Leaf 3	34.285
	CRR073303	Juvenile bud 1	16.095
	CRR073304	Juvenile bud 2	15.190
	CRR073305	Juvenile bud 3	15.715
	CRR073306	Third green 1	14.180
	CRR073307	Third green 2	12.607
	CRR073308	Third green 3	15.719
	CRR073309	Second white 1	26.366
	CRR073310	Second white 2	15.543
	CRR073311	Second white 3	12.995
	CRR073312	Silver flowering 1	21.258
	CRR073313	Silver flowering 2	20.926
	CRR073314	Silver flowering 3	31.203
	CRR073315	Gold flowering 1	11.395
	CRR073316	Gold flowering 2	17.949
	CRR073317	Gold flowering 3	8.594
	CRR073318	Tawny withering 1	24.421
	CRR073319	Tawny withering 2	27.758
	CRR073320	Tawny withering 3	20.467