Detail information of GWHGAAZE015949


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007137447.18.78614E-36hypothetical protein PHAVU_009G127700g [Phaseolus vulgaris]
Swissprottr|Q9XI07|SWI3C_ARATH7E-31SWI/SNF complex subunit SWI3C
trEMBLtr|V7AYW9|V7AYW9_PHAVU3E-36Uncharacterized protein {ECO:0000313|EMBL:ESW09441.1}
TAIR10AT1G21700.13E-25SWITCH/sucrose nonfermenting 3C

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene6417139164173003-
GWHAAZE00000004mRNA6417139164173003-
GWHAAZE00000004exon6417139164171422-
GWHAAZE00000004exon6417254464173003-
GWHAAZE00000004CDS6417254464173003-
GWHAAZE00000004CDS6417139164171422-
Transcript Sequence

Network for GWHGAAZE015949

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K11649SMARCC Thermogenesis map04714

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf4.894
SRR3591706second leaf5.672
SRR3591707mature leaf8.515
SRR3591708Shoot apex4.976
SRR3591709Stem4.661
SRR3591710White floral bud4.631
SRR3591711White flower4.170
SRR3591712Green floral bud2.343
SRR3591713Yellow flower4.640
SRP173429 SRR8316895Juvenile bud stage 1.708
SRR8316896Juvenile bud stage 0.969
SRR8316897Juvenile bud stage 1.369
SRR8316894Third green stage 0.873
SRR8316900Third green stage 2.263
SRR8316901Third green stage 2.857
SRR8316898Complete white stage 0.344
SRR8316899Complete white stage 2.282
SRR8316903Complete white stage 2.973
SRR8316902Silver flowering stage0.862
SRR8316904Silver flowering stage0.905
SRR8316905Silver flowering stage0.892
SRR8316906Gold flowering stage 1.222
SRR8316907Gold flowering stage 0.717
SRR8316908Gold flowering stage 2.489
SRP132670SRR6706286Control2.060
SRR6706287Light intensity 50%2.180
SRR6706288Light intensity 20%2.340
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.983
CNS0095593Slightly white alabastrum(diploid) 20.855
CNS0095594Slightly white alabastrum(diploid) 30.121
CNS0095595Whole white alabastrum(diploid) 20.828
CNS0095596Whole white alabastrum(diploid) 30.789
CNS0095597Whole white alabastrum(diploid) 40.700
CNS0095598Silvery flower (diploied) 11.512
CNS0095599Silvery flower (diploied) 21.551
CNS0095600Silvery flower (diploied) 31.855
CNS0095601Golden flower (diploid) 11.033
CNS0095602Golden flower (diploid) 21.872
CNS0095603Golden flower (diploid) 31.994
CNS0095604Slightly white alabastrum(tetraploid) 12.525
CNS0095605Slightly white alabastrum(tetraploid) 22.360
CNS0095606Slightly white alabastrum(tetraploid) 37.733
CNS0095607Whole white alabastrum(tetraploid) 13.510
CNS0095608Whole white alabastrum(tetraploid) 20.939
CNS0095609Whole white alabastrum(tetraploid) 35.581
CNS0095610Silvery flower (tetraploid) 15.146
CNS0095611Silvery flower (tetraploid) 24.423
CNS0095612Silvery flower (tetraploid) 33.839
CNS0095613Golden flower (tetraploid) 11.880
CNS0095614Golden flower (tetraploid) 25.888
CNS0095615Golden flower (tetraploid) 33.256
CRA001975CRR073297Stem 11.372
CRR073298Stem 21.624
CRR073299Stem 31.739
CRR073300Leaf 11.885
CRR073301Leaf 21.667
CRR073302Leaf 32.287
CRR073303Juvenile bud 11.624
CRR073304Juvenile bud 20.834
CRR073305Juvenile bud 32.228
CRR073306Third green 10.470
CRR073307Third green 20.719
CRR073308Third green 30.969
CRR073309Second white 10.000
CRR073310Second white 20.898
CRR073311Second white 30.754
CRR073312Silver flowering 10.357
CRR073313Silver flowering 20.217
CRR073314Silver flowering 30.216
CRR073315Gold flowering 12.567
CRR073316Gold flowering 21.575
CRR073317Gold flowering 30.854
CRR073318Tawny withering 10.975
CRR073319Tawny withering 20.521
CRR073320Tawny withering 32.497