Detail information of GWHGAAZE015926


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAIA57507.13.2787E-115NAC domain-containing protein [Boehmeria nivea]
Swissprottr|Q39013|NAC2_ARATH3E-107NAC domain-containing protein 2
trEMBLtr|A0A059ZXH8|A0A059ZXH8_BOENI1E-115NAC domain-containing protein {ECO:0000313|EMBL:AIA57507.1}
TAIR10AT1G01720.15E-86NAC (No Apical Meristem) domain transcriptional regulator superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene6334614063347676-
GWHAAZE00000004mRNA6334614063347676-
GWHAAZE00000004exon6334614063346301-
GWHAAZE00000004exon6334702963347306-
GWHAAZE00000004exon6334751763347676-
GWHAAZE00000004CDS6334751763347676-
GWHAAZE00000004CDS6334702963347306-
GWHAAZE00000004CDS6334614063346301-
Transcript Sequence

Network for GWHGAAZE015926

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02365.16NAM81313.70E-39
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyNAC

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355biological_processregulation of transcription, DNA-templated
GO:0003677molecular_functionDNA binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf8.606
SRR3591706second leaf46.824
SRR3591707mature leaf59.731
SRR3591708Shoot apex35.328
SRR3591709Stem39.638
SRR3591710White floral bud73.582
SRR3591711White flower444.098
SRR3591712Green floral bud13.177
SRR3591713Yellow flower626.723
SRP173429 SRR8316895Juvenile bud stage 12.976
SRR8316896Juvenile bud stage 31.650
SRR8316897Juvenile bud stage 8.478
SRR8316894Third green stage 1.569
SRR8316900Third green stage 1.014
SRR8316901Third green stage 4.576
SRR8316898Complete white stage 29.280
SRR8316899Complete white stage 13.887
SRR8316903Complete white stage 35.265
SRR8316902Silver flowering stage201.488
SRR8316904Silver flowering stage238.560
SRR8316905Silver flowering stage129.411
SRR8316906Gold flowering stage 599.758
SRR8316907Gold flowering stage 561.725
SRR8316908Gold flowering stage 545.646
SRP132670SRR6706286Control14.274
SRR6706287Light intensity 50%9.756
SRR6706288Light intensity 20%5.065
CNP0000432CNS0095592Slightly white alabastrum(diploid) 117.062
CNS0095593Slightly white alabastrum(diploid) 217.749
CNS0095594Slightly white alabastrum(diploid) 327.383
CNS0095595Whole white alabastrum(diploid) 217.953
CNS0095596Whole white alabastrum(diploid) 35.768
CNS0095597Whole white alabastrum(diploid) 412.722
CNS0095598Silvery flower (diploied) 177.088
CNS0095599Silvery flower (diploied) 2146.433
CNS0095600Silvery flower (diploied) 3419.201
CNS0095601Golden flower (diploid) 1186.631
CNS0095602Golden flower (diploid) 2552.281
CNS0095603Golden flower (diploid) 3536.779
CNS0095604Slightly white alabastrum(tetraploid) 11.793
CNS0095605Slightly white alabastrum(tetraploid) 21.616
CNS0095606Slightly white alabastrum(tetraploid) 32.615
CNS0095607Whole white alabastrum(tetraploid) 13.576
CNS0095608Whole white alabastrum(tetraploid) 22.556
CNS0095609Whole white alabastrum(tetraploid) 32.478
CNS0095610Silvery flower (tetraploid) 1603.755
CNS0095611Silvery flower (tetraploid) 2485.198
CNS0095612Silvery flower (tetraploid) 3346.681
CNS0095613Golden flower (tetraploid) 1766.618
CNS0095614Golden flower (tetraploid) 2720.951
CNS0095615Golden flower (tetraploid) 31018.921
CRA001975CRR073297Stem 123.829
CRR073298Stem 221.864
CRR073299Stem 322.374
CRR073300Leaf 110.632
CRR073301Leaf 217.369
CRR073302Leaf 34.982
CRR073303Juvenile bud 18.218
CRR073304Juvenile bud 212.920
CRR073305Juvenile bud 37.909
CRR073306Third green 1321.811
CRR073307Third green 2205.311
CRR073308Third green 3218.264
CRR073309Second white 1243.266
CRR073310Second white 2338.068
CRR073311Second white 3247.552
CRR073312Silver flowering 1304.341
CRR073313Silver flowering 2256.216
CRR073314Silver flowering 3278.340
CRR073315Gold flowering 130.362
CRR073316Gold flowering 237.294
CRR073317Gold flowering 334.746
CRR073318Tawny withering 117.638
CRR073319Tawny withering 257.022
CRR073320Tawny withering 318.169