Detail information of GWHGAAZE015840


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002513768.16.6185E-169amino acid transporter, putative [Ricinus communis]
Swissprottr|Q9FEL6|LAX3_MEDTR2E-153Auxin transporter-like protein 3
trEMBLtr|B9RJ49|B9RJ49_RICCO2E-169Amino acid transporter, putative {ECO:0000313|EMBL:EEF48351.1}
TAIR10AT2G21050.18E-123like AUXIN RESISTANT 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene5964334959648658-
GWHAAZE00000004mRNA5964334959648658-
GWHAAZE00000004exon5964334959643543-
GWHAAZE00000004exon5964371159643968-
GWHAAZE00000004exon5964509259645299-
GWHAAZE00000004exon5964664959646746-
GWHAAZE00000004exon5964792259648107-
GWHAAZE00000004exon5964849459648658-
GWHAAZE00000004CDS5964849459648658-
GWHAAZE00000004CDS5964792259648107-
GWHAAZE00000004CDS5964664959646746-
GWHAAZE00000004CDS5964509259645299-
GWHAAZE00000004CDS5964371159643968-
GWHAAZE00000004CDS5964334959643543-
Transcript Sequence

Network for GWHGAAZE015840

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01490.19Aa_trans401173.40E-13
PF01490.19Aa_trans1273125.70E-38
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13946AUX1, LAX Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf33.922
SRR3591706second leaf84.653
SRR3591707mature leaf7.767
SRR3591708Shoot apex53.193
SRR3591709Stem120.105
SRR3591710White floral bud360.782
SRR3591711White flower266.353
SRR3591712Green floral bud27.585
SRR3591713Yellow flower313.093
SRP173429 SRR8316895Juvenile bud stage 3.507
SRR8316896Juvenile bud stage 6.402
SRR8316897Juvenile bud stage 1.392
SRR8316894Third green stage 5.288
SRR8316900Third green stage 18.578
SRR8316901Third green stage 23.478
SRR8316898Complete white stage 111.744
SRR8316899Complete white stage 119.402
SRR8316903Complete white stage 151.675
SRR8316902Silver flowering stage105.286
SRR8316904Silver flowering stage164.822
SRR8316905Silver flowering stage94.795
SRR8316906Gold flowering stage 169.690
SRR8316907Gold flowering stage 203.365
SRR8316908Gold flowering stage 175.080
SRP132670SRR6706286Control38.903
SRR6706287Light intensity 50%33.074
SRR6706288Light intensity 20%29.861
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.530
CNS0095593Slightly white alabastrum(diploid) 210.535
CNS0095594Slightly white alabastrum(diploid) 35.796
CNS0095595Whole white alabastrum(diploid) 210.695
CNS0095596Whole white alabastrum(diploid) 33.529
CNS0095597Whole white alabastrum(diploid) 46.129
CNS0095598Silvery flower (diploied) 133.983
CNS0095599Silvery flower (diploied) 225.955
CNS0095600Silvery flower (diploied) 3125.379
CNS0095601Golden flower (diploid) 116.076
CNS0095602Golden flower (diploid) 2116.764
CNS0095603Golden flower (diploid) 3116.978
CNS0095604Slightly white alabastrum(tetraploid) 112.708
CNS0095605Slightly white alabastrum(tetraploid) 27.156
CNS0095606Slightly white alabastrum(tetraploid) 333.882
CNS0095607Whole white alabastrum(tetraploid) 18.479
CNS0095608Whole white alabastrum(tetraploid) 24.183
CNS0095609Whole white alabastrum(tetraploid) 310.680
CNS0095610Silvery flower (tetraploid) 1116.739
CNS0095611Silvery flower (tetraploid) 281.812
CNS0095612Silvery flower (tetraploid) 3121.869
CNS0095613Golden flower (tetraploid) 144.314
CNS0095614Golden flower (tetraploid) 270.173
CNS0095615Golden flower (tetraploid) 321.870
CRA001975CRR073297Stem 132.256
CRR073298Stem 234.147
CRR073299Stem 335.269
CRR073300Leaf 158.627
CRR073301Leaf 255.430
CRR073302Leaf 345.374
CRR073303Juvenile bud 179.123
CRR073304Juvenile bud 2106.327
CRR073305Juvenile bud 3134.322
CRR073306Third green 1731.547
CRR073307Third green 21212.139
CRR073308Third green 3809.659
CRR073309Second white 1394.638
CRR073310Second white 2221.718
CRR073311Second white 3193.179
CRR073312Silver flowering 1108.944
CRR073313Silver flowering 2119.802
CRR073314Silver flowering 3112.108
CRR073315Gold flowering 137.034
CRR073316Gold flowering 235.146
CRR073317Gold flowering 348.729
CRR073318Tawny withering 160.968
CRR073319Tawny withering 241.058
CRR073320Tawny withering 361.222