Detail information of GWHGAAZE015833


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002307416.10putative phosphatidylinositol-4-phosphate 5-kinase mRNA family protein [Populus trichocarpa]
Swissprottr|Q56YP2|PI5K1_ARATH0Phosphatidylinositol 4-phosphate 5-kinase 1
trEMBLtr|B9H7A5|B9H7A5_POPTR0Putative phosphatidylinositol-4-phosphate 5-kinase mRNA family protein {ECO:0000313|EMBL:EEE94412.1}
TAIR10AT1G21980.10phosphatidylinositol-4-phosphate 5-kinase 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene5915158459156560-
GWHAAZE00000004mRNA5915158459156560-
GWHAAZE00000004exon5915598059156560-
GWHAAZE00000004exon5915481259155417-
GWHAAZE00000004exon5915454459154708-
GWHAAZE00000004exon5915403859154203-
GWHAAZE00000004exon5915380459153890-
GWHAAZE00000004exon5915331959153512-
GWHAAZE00000004exon5915307859153208-
GWHAAZE00000004exon5915290759153000-
GWHAAZE00000004exon5915158459152106-
GWHAAZE00000004CDS5915598059156560-
GWHAAZE00000004CDS5915481259155417-
GWHAAZE00000004CDS5915454459154708-
GWHAAZE00000004CDS5915403859154203-
GWHAAZE00000004CDS5915380459153890-
GWHAAZE00000004CDS5915331959153512-
GWHAAZE00000004CDS5915307859153208-
GWHAAZE00000004CDS5915290759153000-
GWHAAZE00000004CDS5915179759152106-
GWHAAZE00000004three_prime_UTR5915158459151796-
Transcript Sequence

Network for GWHGAAZE015833

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02493.21MORN881102.20E-06
PF02493.21MORN1111321.50E-07
PF02493.21MORN1341560.0009
PF02493.21MORN1571780.00066
PF02493.21MORN1802012.90E-06
PF02493.21MORN2032251.00E-06
PF02493.21MORN2262472.80E-07
PF01504.19PIP5K4717711.30E-85
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00889PIP5K Metabolic pathways map01100
Inositol phosphate metabolismmap00562
MAPK signaling pathway - yeastmap04011
Phosphatidylinositol signaling systemmap04070
Phospholipase D signaling pathwaymap04072
Endocytosismap04144
Mitophagy - yeastmap04139
Focal adhesionmap04510
Regulation of actin cytoskeletonmap04810
Fc gamma R-mediated phagocytosismap04666

Gene Ontology

GO term OntologyName
GO:0046488biological_processphosphatidylinositol metabolic process
GO:0016307molecular_functionphosphatidylinositol phosphate kinase activity
GO:0005524molecular_functionATP binding
GO:0016308molecular_function1-phosphatidylinositol-4-phosphate 5-kinase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf7.322
SRR3591706second leaf27.871
SRR3591707mature leaf25.340
SRR3591708Shoot apex16.527
SRR3591709Stem10.236
SRR3591710White floral bud12.237
SRR3591711White flower13.266
SRR3591712Green floral bud16.592
SRR3591713Yellow flower15.021
SRP173429 SRR8316895Juvenile bud stage 4.547
SRR8316896Juvenile bud stage 7.070
SRR8316897Juvenile bud stage 2.732
SRR8316894Third green stage 5.428
SRR8316900Third green stage 13.656
SRR8316901Third green stage 15.096
SRR8316898Complete white stage 3.393
SRR8316899Complete white stage 9.339
SRR8316903Complete white stage 7.008
SRR8316902Silver flowering stage2.112
SRR8316904Silver flowering stage3.847
SRR8316905Silver flowering stage2.310
SRR8316906Gold flowering stage 6.007
SRR8316907Gold flowering stage 5.795
SRR8316908Gold flowering stage 3.448
SRP132670SRR6706286Control13.279
SRR6706287Light intensity 50%13.527
SRR6706288Light intensity 20%15.574
CNP0000432CNS0095592Slightly white alabastrum(diploid) 15.922
CNS0095593Slightly white alabastrum(diploid) 24.847
CNS0095594Slightly white alabastrum(diploid) 34.509
CNS0095595Whole white alabastrum(diploid) 26.347
CNS0095596Whole white alabastrum(diploid) 36.370
CNS0095597Whole white alabastrum(diploid) 45.363
CNS0095598Silvery flower (diploied) 13.523
CNS0095599Silvery flower (diploied) 23.070
CNS0095600Silvery flower (diploied) 39.382
CNS0095601Golden flower (diploid) 13.039
CNS0095602Golden flower (diploid) 26.560
CNS0095603Golden flower (diploid) 36.529
CNS0095604Slightly white alabastrum(tetraploid) 18.424
CNS0095605Slightly white alabastrum(tetraploid) 28.348
CNS0095606Slightly white alabastrum(tetraploid) 320.341
CNS0095607Whole white alabastrum(tetraploid) 17.258
CNS0095608Whole white alabastrum(tetraploid) 26.054
CNS0095609Whole white alabastrum(tetraploid) 312.418
CNS0095610Silvery flower (tetraploid) 111.930
CNS0095611Silvery flower (tetraploid) 213.838
CNS0095612Silvery flower (tetraploid) 38.567
CNS0095613Golden flower (tetraploid) 16.977
CNS0095614Golden flower (tetraploid) 212.626
CNS0095615Golden flower (tetraploid) 39.793
CRA001975CRR073297Stem 115.140
CRR073298Stem 215.414
CRR073299Stem 38.866
CRR073300Leaf 119.239
CRR073301Leaf 221.264
CRR073302Leaf 313.227
CRR073303Juvenile bud 111.240
CRR073304Juvenile bud 29.498
CRR073305Juvenile bud 313.207
CRR073306Third green 16.649
CRR073307Third green 23.863
CRR073308Third green 35.562
CRR073309Second white 13.943
CRR073310Second white 24.068
CRR073311Second white 34.929
CRR073312Silver flowering 12.441
CRR073313Silver flowering 23.580
CRR073314Silver flowering 33.298
CRR073315Gold flowering 15.090
CRR073316Gold flowering 26.412
CRR073317Gold flowering 33.085
CRR073318Tawny withering 14.739
CRR073319Tawny withering 24.251
CRR073320Tawny withering 34.681