Detail information of GWHGAAZE015471


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011099663.10PREDICTED: farnesylcysteine lyase [Sesamum indicum]
Swissprottr|P57681|PCYOX_ARATH0Farnesylcysteine lyase (Precursor)
trEMBLtr|A0A067EQM7|A0A067EQM7_CITSI0Uncharacterized protein {ECO:0000313|EMBL:KDO57499.1}
TAIR10AT5G63910.12E-164farnesylcysteine lyase

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene4214549042153221-
GWHAAZE00000004mRNA4214549042153221-
GWHAAZE00000004exon4214549042145739-
GWHAAZE00000004exon4214771042147885-
GWHAAZE00000004exon4214828242148641-
GWHAAZE00000004exon4215111442151287-
GWHAAZE00000004exon4215272742153221-
GWHAAZE00000004CDS4215272742153221-
GWHAAZE00000004CDS4215111442151287-
GWHAAZE00000004CDS4214828242148641-
GWHAAZE00000004CDS4214771042147885-
GWHAAZE00000004CDS4214549042145739-
Transcript Sequence

Network for GWHGAAZE015471

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13450.7NAD_binding_830934.70E-12
PF07156.15Prenylcys_lyase1374652.60E-103
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K05906PCYOX1, FCLY Biosynthesis of secondary metabolites map01110
Terpenoid backbone biosynthesismap00900

Gene Ontology

GO term OntologyName
GO:0030328biological_processprenylcysteine catabolic process
GO:0055114biological_processoxidation-reduction process
GO:0001735molecular_functionprenylcysteine oxidase activity
GO:0016670molecular_functionoxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf22.418
SRR3591706second leaf19.111
SRR3591707mature leaf27.683
SRR3591708Shoot apex20.095
SRR3591709Stem16.028
SRR3591710White floral bud11.276
SRR3591711White flower16.659
SRR3591712Green floral bud15.289
SRR3591713Yellow flower11.520
SRP173429 SRR8316895Juvenile bud stage 19.027
SRR8316896Juvenile bud stage 22.862
SRR8316897Juvenile bud stage 20.327
SRR8316894Third green stage 4.349
SRR8316900Third green stage 11.281
SRR8316901Third green stage 11.710
SRR8316898Complete white stage 2.056
SRR8316899Complete white stage 16.731
SRR8316903Complete white stage 3.613
SRR8316902Silver flowering stage1.397
SRR8316904Silver flowering stage1.467
SRR8316905Silver flowering stage0.470
SRR8316906Gold flowering stage 2.390
SRR8316907Gold flowering stage 0.616
SRR8316908Gold flowering stage 3.547
SRP132670SRR6706286Control8.351
SRR6706287Light intensity 50%8.041
SRR6706288Light intensity 20%8.386
CNP0000432CNS0095592Slightly white alabastrum(diploid) 112.213
CNS0095593Slightly white alabastrum(diploid) 212.203
CNS0095594Slightly white alabastrum(diploid) 315.233
CNS0095595Whole white alabastrum(diploid) 213.919
CNS0095596Whole white alabastrum(diploid) 36.954
CNS0095597Whole white alabastrum(diploid) 48.243
CNS0095598Silvery flower (diploied) 116.205
CNS0095599Silvery flower (diploied) 223.361
CNS0095600Silvery flower (diploied) 38.336
CNS0095601Golden flower (diploid) 115.092
CNS0095602Golden flower (diploid) 216.114
CNS0095603Golden flower (diploid) 314.997
CNS0095604Slightly white alabastrum(tetraploid) 19.595
CNS0095605Slightly white alabastrum(tetraploid) 29.307
CNS0095606Slightly white alabastrum(tetraploid) 319.325
CNS0095607Whole white alabastrum(tetraploid) 15.736
CNS0095608Whole white alabastrum(tetraploid) 24.601
CNS0095609Whole white alabastrum(tetraploid) 310.524
CNS0095610Silvery flower (tetraploid) 16.222
CNS0095611Silvery flower (tetraploid) 28.184
CNS0095612Silvery flower (tetraploid) 34.025
CNS0095613Golden flower (tetraploid) 12.481
CNS0095614Golden flower (tetraploid) 24.179
CNS0095615Golden flower (tetraploid) 32.123
CRA001975CRR073297Stem 112.962
CRR073298Stem 29.785
CRR073299Stem 313.005
CRR073300Leaf 110.361
CRR073301Leaf 210.988
CRR073302Leaf 310.858
CRR073303Juvenile bud 111.119
CRR073304Juvenile bud 27.956
CRR073305Juvenile bud 310.644
CRR073306Third green 11.741
CRR073307Third green 20.458
CRR073308Third green 30.862
CRR073309Second white 11.218
CRR073310Second white 21.130
CRR073311Second white 31.373
CRR073312Silver flowering 11.622
CRR073313Silver flowering 21.353
CRR073314Silver flowering 31.996
CRR073315Gold flowering 124.137
CRR073316Gold flowering 235.080
CRR073317Gold flowering 329.840
CRR073318Tawny withering 117.705
CRR073319Tawny withering 219.148
CRR073320Tawny withering 39.816