Detail information of GWHGAAZE015381


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrADL18409.11.38538E-84profilin [Gossypium hirsutum]
Swissprottr|O82572|PROF1_RICCO1E-85Profilin-1
trEMBLtr|E0XJL2|E0XJL2_GOSHI5E-85Profilin {ECO:0000256|RuleBase:RU003909}
TAIR10AT4G29350.13E-57profilin 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene3711539737118790+
GWHAAZE00000004mRNA3711539737118790+
GWHAAZE00000004exon3711539737115519+
GWHAAZE00000004exon3711712037117257+
GWHAAZE00000004exon3711793537118077+
GWHAAZE00000004exon3711853137118790+
GWHAAZE00000004CDS3711539737115519+
GWHAAZE00000004CDS3711712037117257+
GWHAAZE00000004CDS3711793537118069+
GWHAAZE00000004three_prime_UTR3711807037118077+
GWHAAZE00000004three_prime_UTR3711853137118790+
Transcript Sequence

Network for GWHGAAZE015381

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00235.20Profilin11301.80E-43
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K05759PFN Rap1 signaling pathway map04015
MAPK signaling pathway - flymap04013
Regulation of actin cytoskeletonmap04810

Gene Ontology

GO term OntologyName
GO:0003779molecular_functionactin binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf418.134
SRR3591706second leaf209.137
SRR3591707mature leaf204.445
SRR3591708Shoot apex235.736
SRR3591709Stem460.785
SRR3591710White floral bud284.940
SRR3591711White flower255.932
SRR3591712Green floral bud277.464
SRR3591713Yellow flower189.843
SRP173429 SRR8316895Juvenile bud stage 161.967
SRR8316896Juvenile bud stage 209.470
SRR8316897Juvenile bud stage 102.573
SRR8316894Third green stage 85.154
SRR8316900Third green stage 295.620
SRR8316901Third green stage 261.304
SRR8316898Complete white stage 212.341
SRR8316899Complete white stage 483.712
SRR8316903Complete white stage 310.070
SRR8316902Silver flowering stage161.466
SRR8316904Silver flowering stage195.962
SRR8316905Silver flowering stage95.928
SRR8316906Gold flowering stage 200.786
SRR8316907Gold flowering stage 215.805
SRR8316908Gold flowering stage 199.115
SRP132670SRR6706286Control434.694
SRR6706287Light intensity 50%426.561
SRR6706288Light intensity 20%477.526
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1223.351
CNS0095593Slightly white alabastrum(diploid) 2277.451
CNS0095594Slightly white alabastrum(diploid) 3201.417
CNS0095595Whole white alabastrum(diploid) 2212.109
CNS0095596Whole white alabastrum(diploid) 3224.808
CNS0095597Whole white alabastrum(diploid) 4218.531
CNS0095598Silvery flower (diploied) 1243.196
CNS0095599Silvery flower (diploied) 2254.490
CNS0095600Silvery flower (diploied) 3331.682
CNS0095601Golden flower (diploid) 1194.148
CNS0095602Golden flower (diploid) 2279.080
CNS0095603Golden flower (diploid) 3258.660
CNS0095604Slightly white alabastrum(tetraploid) 1205.835
CNS0095605Slightly white alabastrum(tetraploid) 2180.117
CNS0095606Slightly white alabastrum(tetraploid) 3336.149
CNS0095607Whole white alabastrum(tetraploid) 1146.923
CNS0095608Whole white alabastrum(tetraploid) 2157.658
CNS0095609Whole white alabastrum(tetraploid) 3219.574
CNS0095610Silvery flower (tetraploid) 1216.190
CNS0095611Silvery flower (tetraploid) 2230.181
CNS0095612Silvery flower (tetraploid) 3199.138
CNS0095613Golden flower (tetraploid) 1169.529
CNS0095614Golden flower (tetraploid) 2173.314
CNS0095615Golden flower (tetraploid) 3164.896
CRA001975CRR073297Stem 1179.608
CRR073298Stem 2186.873
CRR073299Stem 3233.898
CRR073300Leaf 1205.708
CRR073301Leaf 2227.279
CRR073302Leaf 3247.018
CRR073303Juvenile bud 1315.995
CRR073304Juvenile bud 2280.323
CRR073305Juvenile bud 3254.284
CRR073306Third green 1272.182
CRR073307Third green 2405.777
CRR073308Third green 3284.131
CRR073309Second white 1181.301
CRR073310Second white 2132.951
CRR073311Second white 375.102
CRR073312Silver flowering 183.471
CRR073313Silver flowering 2117.850
CRR073314Silver flowering 385.926
CRR073315Gold flowering 1198.509
CRR073316Gold flowering 2185.511
CRR073317Gold flowering 3190.252
CRR073318Tawny withering 1268.075
CRR073319Tawny withering 2231.444
CRR073320Tawny withering 3304.229