Detail information of GWHGAAZE015305


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009614749.12.56227E-83PREDICTED: inorganic pyrophosphatase 3-like [Nicotiana tomentosiformis]
Swissprottr|Q67YC0|PPSP1_ARATH1E-67Inorganic pyrophosphatase 1
trEMBLtr|B9RKA9|B9RKA9_RICCO5E-76Pyridoxal phosphate phosphatase PHOSPHO2, putative {ECO:0000313|EMBL:EEF48107.1}
TAIR10AT4G29530.13E-35Pyridoxal phosphate phosphatase-related protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene3097452330980927-
GWHAAZE00000004mRNA3097452330980927-
GWHAAZE00000004exon3097452330974804-
GWHAAZE00000004exon3097882830978998-
GWHAAZE00000004exon3098078430980927-
GWHAAZE00000004CDS3098078430980927-
GWHAAZE00000004CDS3097882830978998-
GWHAAZE00000004CDS3097452330974804-
Transcript Sequence

Network for GWHGAAZE015305

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06888.13Put_Phosphatase6854.70E-28
PF06888.13Put_Phosphatase1051867.60E-25
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13248PHOSPHO2 Metabolic pathways map01100
Vitamin B6 metabolismmap00750

Gene Ontology

GO term OntologyName
GO:0016791molecular_functionphosphatase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf24.203
SRR3591706second leaf5.347
SRR3591707mature leaf2.285
SRR3591708Shoot apex6.872
SRR3591709Stem14.204
SRR3591710White floral bud233.905
SRR3591711White flower69.647
SRR3591712Green floral bud30.178
SRR3591713Yellow flower37.257
SRP173429 SRR8316895Juvenile bud stage 5.602
SRR8316896Juvenile bud stage 14.720
SRR8316897Juvenile bud stage 3.792
SRR8316894Third green stage 4.612
SRR8316900Third green stage 22.227
SRR8316901Third green stage 21.590
SRR8316898Complete white stage 61.063
SRR8316899Complete white stage 25.091
SRR8316903Complete white stage 73.438
SRR8316902Silver flowering stage107.876
SRR8316904Silver flowering stage112.760
SRR8316905Silver flowering stage68.018
SRR8316906Gold flowering stage 183.606
SRR8316907Gold flowering stage 193.395
SRR8316908Gold flowering stage 158.417
SRP132670SRR6706286Control31.082
SRR6706287Light intensity 50%33.033
SRR6706288Light intensity 20%26.296
CNP0000432CNS0095592Slightly white alabastrum(diploid) 113.945
CNS0095593Slightly white alabastrum(diploid) 212.079
CNS0095594Slightly white alabastrum(diploid) 317.263
CNS0095595Whole white alabastrum(diploid) 211.027
CNS0095596Whole white alabastrum(diploid) 316.913
CNS0095597Whole white alabastrum(diploid) 411.937
CNS0095598Silvery flower (diploied) 114.210
CNS0095599Silvery flower (diploied) 216.541
CNS0095600Silvery flower (diploied) 333.361
CNS0095601Golden flower (diploid) 19.412
CNS0095602Golden flower (diploid) 216.637
CNS0095603Golden flower (diploid) 315.566
CNS0095604Slightly white alabastrum(tetraploid) 119.816
CNS0095605Slightly white alabastrum(tetraploid) 214.434
CNS0095606Slightly white alabastrum(tetraploid) 317.678
CNS0095607Whole white alabastrum(tetraploid) 120.175
CNS0095608Whole white alabastrum(tetraploid) 216.666
CNS0095609Whole white alabastrum(tetraploid) 324.308
CNS0095610Silvery flower (tetraploid) 138.314
CNS0095611Silvery flower (tetraploid) 224.807
CNS0095612Silvery flower (tetraploid) 3122.817
CNS0095613Golden flower (tetraploid) 126.893
CNS0095614Golden flower (tetraploid) 216.920
CNS0095615Golden flower (tetraploid) 340.730
CRA001975CRR073297Stem 15.022
CRR073298Stem 25.154
CRR073299Stem 34.320
CRR073300Leaf 16.248
CRR073301Leaf 26.708
CRR073302Leaf 37.752
CRR073303Juvenile bud 14.979
CRR073304Juvenile bud 215.327
CRR073305Juvenile bud 35.796
CRR073306Third green 1187.156
CRR073307Third green 2160.566
CRR073308Third green 3134.501
CRR073309Second white 193.033
CRR073310Second white 299.569
CRR073311Second white 385.673
CRR073312Silver flowering 155.544
CRR073313Silver flowering 226.877
CRR073314Silver flowering 320.769
CRR073315Gold flowering 18.087
CRR073316Gold flowering 26.250
CRR073317Gold flowering 36.200
CRR073318Tawny withering 16.065
CRR073319Tawny withering 24.983
CRR073320Tawny withering 38.074