Detail information of GWHGAAZE015258


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007204691.11.80473E-28hypothetical protein PRUPE_ppa007796mg [Prunus persica]
Swissprottr|Q8W119|SMH4_MAIZE6E-20Single myb histone 4
trEMBLtr|M5WGH8|M5WGH8_PRUPE7E-29Uncharacterized protein {ECO:0000313|EMBL:EMJ05890.1}
TAIR10AT1G72740.21E-15Homeodomain-like/winged-helix DNA-binding family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene2911301429113367+
GWHAAZE00000004mRNA2911301429113367+
GWHAAZE00000004exon2911301429113256+
GWHAAZE00000004exon2911334729113367+
GWHAAZE00000004CDS2911301429113256+
GWHAAZE00000004CDS2911334729113367+
Transcript Sequence

Network for GWHGAAZE015258

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00249.32Myb_DNA-binding36642.90E-08
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMYB-related

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677molecular_functionDNA binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf20.350
SRR3591706second leaf11.910
SRR3591707mature leaf12.305
SRR3591708Shoot apex17.140
SRR3591709Stem14.632
SRR3591710White floral bud11.198
SRR3591711White flower19.148
SRR3591712Green floral bud11.830
SRR3591713Yellow flower13.533
SRP173429 SRR8316895Juvenile bud stage 16.057
SRR8316896Juvenile bud stage 21.769
SRR8316897Juvenile bud stage 7.413
SRR8316894Third green stage 6.429
SRR8316900Third green stage 18.216
SRR8316901Third green stage 19.258
SRR8316898Complete white stage 5.336
SRR8316899Complete white stage 19.502
SRR8316903Complete white stage 6.837
SRR8316902Silver flowering stage5.310
SRR8316904Silver flowering stage6.968
SRR8316905Silver flowering stage3.564
SRR8316906Gold flowering stage 15.836
SRR8316907Gold flowering stage 11.858
SRR8316908Gold flowering stage 14.034
SRP132670SRR6706286Control34.554
SRR6706287Light intensity 50%31.784
SRR6706288Light intensity 20%33.088
CNP0000432CNS0095592Slightly white alabastrum(diploid) 114.569
CNS0095593Slightly white alabastrum(diploid) 214.949
CNS0095594Slightly white alabastrum(diploid) 316.430
CNS0095595Whole white alabastrum(diploid) 213.105
CNS0095596Whole white alabastrum(diploid) 39.830
CNS0095597Whole white alabastrum(diploid) 48.378
CNS0095598Silvery flower (diploied) 122.142
CNS0095599Silvery flower (diploied) 214.142
CNS0095600Silvery flower (diploied) 313.191
CNS0095601Golden flower (diploid) 120.405
CNS0095602Golden flower (diploid) 218.944
CNS0095603Golden flower (diploid) 318.254
CNS0095604Slightly white alabastrum(tetraploid) 116.854
CNS0095605Slightly white alabastrum(tetraploid) 215.392
CNS0095606Slightly white alabastrum(tetraploid) 334.928
CNS0095607Whole white alabastrum(tetraploid) 111.475
CNS0095608Whole white alabastrum(tetraploid) 22.382
CNS0095609Whole white alabastrum(tetraploid) 317.850
CNS0095610Silvery flower (tetraploid) 119.713
CNS0095611Silvery flower (tetraploid) 219.006
CNS0095612Silvery flower (tetraploid) 37.617
CNS0095613Golden flower (tetraploid) 110.525
CNS0095614Golden flower (tetraploid) 225.034
CNS0095615Golden flower (tetraploid) 39.047
CRA001975CRR073297Stem 118.593
CRR073298Stem 222.066
CRR073299Stem 317.557
CRR073300Leaf 117.085
CRR073301Leaf 218.195
CRR073302Leaf 315.512
CRR073303Juvenile bud 110.817
CRR073304Juvenile bud 25.716
CRR073305Juvenile bud 311.117
CRR073306Third green 11.479
CRR073307Third green 23.509
CRR073308Third green 33.484
CRR073309Second white 14.371
CRR073310Second white 26.859
CRR073311Second white 32.272
CRR073312Silver flowering 110.457
CRR073313Silver flowering 20.955
CRR073314Silver flowering 34.190
CRR073315Gold flowering 17.386
CRR073316Gold flowering 213.332
CRR073317Gold flowering 36.995
CRR073318Tawny withering 110.900
CRR073319Tawny withering 29.252
CRR073320Tawny withering 36.174