Detail information of GWHGAAZE015143


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011069335.11.2006E-71PREDICTED: 15.7 kDa heat shock protein, peroxisomal [Sesamum indicum]
Swissprottr|Q9FHQ3|HS157_ARATH9E-5115.7 kDa heat shock protein, peroxisomal
trEMBLtr|W9RRW7|W9RRW7_9ROSA1E-71Uncharacterized protein {ECO:0000313|EMBL:EXC05431.1}
TAIR10AT5G37670.11E-40HSP20-like chaperones superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene2612776826128285+
GWHAAZE00000004mRNA2612776826128285+
GWHAAZE00000004exon2612776826127900+
GWHAAZE00000004exon2612799926128285+
GWHAAZE00000004CDS2612776826127900+
GWHAAZE00000004CDS2612799926128285+
Transcript Sequence

Network for GWHGAAZE015143

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00011.22HSP20291365.50E-24
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13993HSP20 Protein processing in endoplasmic reticulum map04141

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf47.237
SRR3591706second leaf15.392
SRR3591707mature leaf20.005
SRR3591708Shoot apex89.685
SRR3591709Stem29.850
SRR3591710White floral bud35.074
SRR3591711White flower43.208
SRR3591712Green floral bud21.591
SRR3591713Yellow flower32.180
SRP173429 SRR8316895Juvenile bud stage 136.624
SRR8316896Juvenile bud stage 374.014
SRR8316897Juvenile bud stage 146.583
SRR8316894Third green stage 25.924
SRR8316900Third green stage 80.000
SRR8316901Third green stage 74.365
SRR8316898Complete white stage 4.077
SRR8316899Complete white stage 30.766
SRR8316903Complete white stage 17.768
SRR8316902Silver flowering stage11.486
SRR8316904Silver flowering stage7.834
SRR8316905Silver flowering stage7.451
SRR8316906Gold flowering stage 35.277
SRR8316907Gold flowering stage 32.539
SRR8316908Gold flowering stage 17.217
SRP132670SRR6706286Control116.982
SRR6706287Light intensity 50%60.867
SRR6706288Light intensity 20%61.584
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1129.704
CNS0095593Slightly white alabastrum(diploid) 281.188
CNS0095594Slightly white alabastrum(diploid) 396.797
CNS0095595Whole white alabastrum(diploid) 270.026
CNS0095596Whole white alabastrum(diploid) 365.922
CNS0095597Whole white alabastrum(diploid) 458.310
CNS0095598Silvery flower (diploied) 1207.618
CNS0095599Silvery flower (diploied) 2382.449
CNS0095600Silvery flower (diploied) 3140.708
CNS0095601Golden flower (diploid) 1853.302
CNS0095602Golden flower (diploid) 2250.987
CNS0095603Golden flower (diploid) 3255.818
CNS0095604Slightly white alabastrum(tetraploid) 157.343
CNS0095605Slightly white alabastrum(tetraploid) 285.524
CNS0095606Slightly white alabastrum(tetraploid) 389.202
CNS0095607Whole white alabastrum(tetraploid) 139.471
CNS0095608Whole white alabastrum(tetraploid) 245.592
CNS0095609Whole white alabastrum(tetraploid) 364.628
CNS0095610Silvery flower (tetraploid) 1116.637
CNS0095611Silvery flower (tetraploid) 2193.602
CNS0095612Silvery flower (tetraploid) 3203.721
CNS0095613Golden flower (tetraploid) 1108.742
CNS0095614Golden flower (tetraploid) 2101.319
CNS0095615Golden flower (tetraploid) 38.455
CRA001975CRR073297Stem 138.920
CRR073298Stem 241.196
CRR073299Stem 336.388
CRR073300Leaf 117.088
CRR073301Leaf 217.015
CRR073302Leaf 315.283
CRR073303Juvenile bud 119.866
CRR073304Juvenile bud 28.582
CRR073305Juvenile bud 313.771
CRR073306Third green 13.044
CRR073307Third green 22.568
CRR073308Third green 33.907
CRR073309Second white 15.843
CRR073310Second white 22.778
CRR073311Second white 35.665
CRR073312Silver flowering 16.580
CRR073313Silver flowering 26.343
CRR073314Silver flowering 36.906
CRR073315Gold flowering 114.071
CRR073316Gold flowering 212.708
CRR073317Gold flowering 37.693
CRR073318Tawny withering 15.019
CRR073319Tawny withering 210.342
CRR073320Tawny withering 312.552