Detail information of GWHGAAZE015022


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009784818.11.1683E-106PREDICTED: dehydrodolichyl diphosphate synthase 6-like [Nicotiana sylvestris]
Swissprottr|Q8S2T1|DDPS6_ARATH1E-97Dehydrodolichyl diphosphate synthase 6
trEMBLtr|A0A022QNU4|A0A022QNU4_ERYGU4E-101Uncharacterized protein {ECO:0000313|EMBL:EYU30377.1}
TAIR10AT2G17570.14E-79Undecaprenyl pyrophosphate synthetase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene2344905923449810-
GWHAAZE00000004mRNA2344905923449810-
GWHAAZE00000004exon2344927123449810-
GWHAAZE00000004exon2344905923449235-
GWHAAZE00000004CDS2344927123449810-
GWHAAZE00000004CDS2344905923449235-
Transcript Sequence

Network for GWHGAAZE015022

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01255.20Prenyltransf212171.40E-64
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K11778DHDDS, RER2, SRT1 Biosynthesis of secondary metabolites map01110
Terpenoid backbone biosynthesismap00900

Gene Ontology

GO term OntologyName
GO:0016765molecular_functiontransferase activity, transferring alkyl or aryl (other than methyl) groups

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf4.531
SRR3591706second leaf2.885
SRR3591707mature leaf3.901
SRR3591708Shoot apex1.627
SRR3591709Stem9.198
SRR3591710White floral bud5.570
SRR3591711White flower5.875
SRR3591712Green floral bud6.032
SRR3591713Yellow flower1.367
SRP173429 SRR8316895Juvenile bud stage 4.403
SRR8316896Juvenile bud stage 8.221
SRR8316897Juvenile bud stage 2.433
SRR8316894Third green stage 3.333
SRR8316900Third green stage 15.045
SRR8316901Third green stage 11.080
SRR8316898Complete white stage 2.566
SRR8316899Complete white stage 21.998
SRR8316903Complete white stage 3.585
SRR8316902Silver flowering stage4.955
SRR8316904Silver flowering stage3.652
SRR8316905Silver flowering stage1.299
SRR8316906Gold flowering stage 4.185
SRR8316907Gold flowering stage 6.720
SRR8316908Gold flowering stage 1.552
SRP132670SRR6706286Control13.753
SRR6706287Light intensity 50%14.216
SRR6706288Light intensity 20%15.967
CNP0000432CNS0095592Slightly white alabastrum(diploid) 111.153
CNS0095593Slightly white alabastrum(diploid) 223.373
CNS0095594Slightly white alabastrum(diploid) 312.843
CNS0095595Whole white alabastrum(diploid) 215.828
CNS0095596Whole white alabastrum(diploid) 312.314
CNS0095597Whole white alabastrum(diploid) 415.944
CNS0095598Silvery flower (diploied) 116.326
CNS0095599Silvery flower (diploied) 210.416
CNS0095600Silvery flower (diploied) 35.269
CNS0095601Golden flower (diploid) 16.453
CNS0095602Golden flower (diploid) 24.735
CNS0095603Golden flower (diploid) 35.483
CNS0095604Slightly white alabastrum(tetraploid) 113.196
CNS0095605Slightly white alabastrum(tetraploid) 212.602
CNS0095606Slightly white alabastrum(tetraploid) 315.947
CNS0095607Whole white alabastrum(tetraploid) 112.274
CNS0095608Whole white alabastrum(tetraploid) 214.699
CNS0095609Whole white alabastrum(tetraploid) 310.781
CNS0095610Silvery flower (tetraploid) 14.244
CNS0095611Silvery flower (tetraploid) 24.168
CNS0095612Silvery flower (tetraploid) 33.597
CNS0095613Golden flower (tetraploid) 12.963
CNS0095614Golden flower (tetraploid) 23.690
CNS0095615Golden flower (tetraploid) 30.922
CRA001975CRR073297Stem 16.433
CRR073298Stem 26.883
CRR073299Stem 34.109
CRR073300Leaf 19.775
CRR073301Leaf 213.827
CRR073302Leaf 38.803
CRR073303Juvenile bud 115.943
CRR073304Juvenile bud 27.301
CRR073305Juvenile bud 318.023
CRR073306Third green 11.880
CRR073307Third green 21.568
CRR073308Third green 34.375
CRR073309Second white 12.672
CRR073310Second white 21.823
CRR073311Second white 30.992
CRR073312Silver flowering 10.023
CRR073313Silver flowering 20.501
CRR073314Silver flowering 30.123
CRR073315Gold flowering 112.156
CRR073316Gold flowering 212.242
CRR073317Gold flowering 36.380
CRR073318Tawny withering 131.576
CRR073319Tawny withering 242.018
CRR073320Tawny withering 332.873