Detail information of GWHGAAZE014928


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007046727.11.89699E-70Peptidylprolyl cis/trans isomerase [Theobroma cacao]
Swissprottr|Q94G00|PIN1_MALDO2E-69Peptidyl-prolyl cis-trans isomerase Pin1
trEMBLtr|A0A061DFC2|A0A061DFC2_THECC7E-71Peptidylprolyl cis/trans isomerase {ECO:0000313|EMBL:EOX90884.1}
TAIR10AT2G18040.11E-50peptidylprolyl cis/trans isomerase, NIMA-interacting 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene2175960021763976-
GWHAAZE00000004mRNA2175960021763976-
GWHAAZE00000004exon2176373321763976-
GWHAAZE00000004exon2175960021759724-
GWHAAZE00000004CDS2176373321763976-
GWHAAZE00000004CDS2175960021759724-
Transcript Sequence

Network for GWHGAAZE014928

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00639.22Rotamase141217.90E-26
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K09578PIN1 RIG-I-like receptor signaling pathway map04622

Gene Ontology

GO term OntologyName
GO:0003755molecular_functionpeptidyl-prolyl cis-trans isomerase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf195.258
SRR3591706second leaf93.793
SRR3591707mature leaf76.992
SRR3591708Shoot apex155.953
SRR3591709Stem193.470
SRR3591710White floral bud226.281
SRR3591711White flower288.016
SRR3591712Green floral bud217.866
SRR3591713Yellow flower335.991
SRP173429 SRR8316895Juvenile bud stage 93.939
SRR8316896Juvenile bud stage 123.763
SRR8316897Juvenile bud stage 86.117
SRR8316894Third green stage 60.963
SRR8316900Third green stage 190.953
SRR8316901Third green stage 172.886
SRR8316898Complete white stage 110.245
SRR8316899Complete white stage 207.113
SRR8316903Complete white stage 156.524
SRR8316902Silver flowering stage138.036
SRR8316904Silver flowering stage153.376
SRR8316905Silver flowering stage101.346
SRR8316906Gold flowering stage 253.076
SRR8316907Gold flowering stage 274.576
SRR8316908Gold flowering stage 244.950
SRP132670SRR6706286Control253.311
SRR6706287Light intensity 50%258.822
SRR6706288Light intensity 20%271.743
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1191.506
CNS0095593Slightly white alabastrum(diploid) 2237.521
CNS0095594Slightly white alabastrum(diploid) 3188.179
CNS0095595Whole white alabastrum(diploid) 2169.300
CNS0095596Whole white alabastrum(diploid) 3186.482
CNS0095597Whole white alabastrum(diploid) 4170.079
CNS0095598Silvery flower (diploied) 1155.691
CNS0095599Silvery flower (diploied) 2187.599
CNS0095600Silvery flower (diploied) 3292.865
CNS0095601Golden flower (diploid) 1185.086
CNS0095602Golden flower (diploid) 2271.264
CNS0095603Golden flower (diploid) 3259.910
CNS0095604Slightly white alabastrum(tetraploid) 1196.287
CNS0095605Slightly white alabastrum(tetraploid) 2168.853
CNS0095606Slightly white alabastrum(tetraploid) 3191.058
CNS0095607Whole white alabastrum(tetraploid) 1119.213
CNS0095608Whole white alabastrum(tetraploid) 2134.469
CNS0095609Whole white alabastrum(tetraploid) 3163.590
CNS0095610Silvery flower (tetraploid) 1270.517
CNS0095611Silvery flower (tetraploid) 2270.338
CNS0095612Silvery flower (tetraploid) 3213.965
CNS0095613Golden flower (tetraploid) 1303.682
CNS0095614Golden flower (tetraploid) 2268.976
CNS0095615Golden flower (tetraploid) 3291.029
CRA001975CRR073297Stem 1160.230
CRR073298Stem 2149.725
CRR073299Stem 3193.544
CRR073300Leaf 1199.635
CRR073301Leaf 2218.761
CRR073302Leaf 3264.698
CRR073303Juvenile bud 1271.934
CRR073304Juvenile bud 2277.609
CRR073305Juvenile bud 3280.427
CRR073306Third green 1350.550
CRR073307Third green 2358.873
CRR073308Third green 3300.540
CRR073309Second white 1368.006
CRR073310Second white 2230.074
CRR073311Second white 3191.061
CRR073312Silver flowering 1249.779
CRR073313Silver flowering 2301.055
CRR073314Silver flowering 3193.458
CRR073315Gold flowering 190.760
CRR073316Gold flowering 281.860
CRR073317Gold flowering 392.723
CRR073318Tawny withering 1233.705
CRR073319Tawny withering 2229.862
CRR073320Tawny withering 3248.168