Detail information of GWHGAAZE014925


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011099810.14.25451E-88PREDICTED: protein BASIC PENTACYSTEINE6-like [Sesamum indicum]
Swissprottr|Q5VSA8|BBRD_ORYSJ1E-61Barley B recombinant-like protein D
trEMBLtr|H1ZN84|H1ZN84_TOBAC3E-84GAGA-binding transcriptional activator {ECO:0000313|EMBL:ADV59384.1}
TAIR10AT5G42520.23E-28basic pentacysteine 6

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene2172929921730114+
GWHAAZE00000004mRNA2172929921730114+
GWHAAZE00000004exon2172929921730114+
GWHAAZE00000004CDS2172929921730114+
Transcript Sequence

Network for GWHGAAZE014925

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06217.13GAGA_bind12668.10E-63
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyBBR-BPC

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf65.269
SRR3591706second leaf36.574
SRR3591707mature leaf30.570
SRR3591708Shoot apex62.828
SRR3591709Stem78.496
SRR3591710White floral bud78.049
SRR3591711White flower93.945
SRR3591712Green floral bud47.668
SRR3591713Yellow flower94.214
SRP173429 SRR8316895Juvenile bud stage 41.937
SRR8316896Juvenile bud stage 58.347
SRR8316897Juvenile bud stage 26.427
SRR8316894Third green stage 16.870
SRR8316900Third green stage 43.756
SRR8316901Third green stage 56.745
SRR8316898Complete white stage 53.909
SRR8316899Complete white stage 92.258
SRR8316903Complete white stage 77.696
SRR8316902Silver flowering stage95.868
SRR8316904Silver flowering stage84.887
SRR8316905Silver flowering stage45.971
SRR8316906Gold flowering stage 152.021
SRR8316907Gold flowering stage 147.833
SRR8316908Gold flowering stage 129.034
SRP132670SRR6706286Control63.885
SRR6706287Light intensity 50%69.729
SRR6706288Light intensity 20%64.999
CNP0000432CNS0095592Slightly white alabastrum(diploid) 165.854
CNS0095593Slightly white alabastrum(diploid) 263.563
CNS0095594Slightly white alabastrum(diploid) 368.027
CNS0095595Whole white alabastrum(diploid) 252.703
CNS0095596Whole white alabastrum(diploid) 335.815
CNS0095597Whole white alabastrum(diploid) 442.987
CNS0095598Silvery flower (diploied) 184.682
CNS0095599Silvery flower (diploied) 294.363
CNS0095600Silvery flower (diploied) 3113.803
CNS0095601Golden flower (diploid) 190.770
CNS0095602Golden flower (diploid) 2102.541
CNS0095603Golden flower (diploid) 397.496
CNS0095604Slightly white alabastrum(tetraploid) 142.891
CNS0095605Slightly white alabastrum(tetraploid) 238.384
CNS0095606Slightly white alabastrum(tetraploid) 359.374
CNS0095607Whole white alabastrum(tetraploid) 132.563
CNS0095608Whole white alabastrum(tetraploid) 225.084
CNS0095609Whole white alabastrum(tetraploid) 336.293
CNS0095610Silvery flower (tetraploid) 184.823
CNS0095611Silvery flower (tetraploid) 262.786
CNS0095612Silvery flower (tetraploid) 3115.052
CNS0095613Golden flower (tetraploid) 173.255
CNS0095614Golden flower (tetraploid) 268.700
CNS0095615Golden flower (tetraploid) 3104.540
CRA001975CRR073297Stem 181.637
CRR073298Stem 275.461
CRR073299Stem 385.590
CRR073300Leaf 180.073
CRR073301Leaf 294.974
CRR073302Leaf 377.037
CRR073303Juvenile bud 175.747
CRR073304Juvenile bud 281.109
CRR073305Juvenile bud 388.270
CRR073306Third green 1145.489
CRR073307Third green 2150.030
CRR073308Third green 3134.855
CRR073309Second white 199.532
CRR073310Second white 2100.065
CRR073311Second white 397.596
CRR073312Silver flowering 190.673
CRR073313Silver flowering 274.949
CRR073314Silver flowering 356.435
CRR073315Gold flowering 171.143
CRR073316Gold flowering 288.834
CRR073317Gold flowering 362.310
CRR073318Tawny withering 1148.550
CRR073319Tawny withering 2189.108
CRR073320Tawny withering 3136.176