Detail information of GWHGAAZE014899


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007202517.15.3202E-125hypothetical protein PRUPE_ppa010911mg [Prunus persica]
Swissprottr|Q9SD42|RTH_ARATH2E-102Protein RTE1-HOMOLOG
trEMBLtr|M5VRS1|M5VRS1_PRUPE2E-125Uncharacterized protein {ECO:0000313|EMBL:EMJ03716.1}
TAIR10AT3G51040.32E-73RTE1-homolog

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene2115703021158178-
GWHAAZE00000004mRNA2115703021158178-
GWHAAZE00000004exon2115703021157455-
GWHAAZE00000004exon2115790921158178-
GWHAAZE00000004CDS2115790921158178-
GWHAAZE00000004CDS2115703021157455-
Transcript Sequence

Network for GWHGAAZE014899

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05608.13DUF77839884.50E-22
PF05608.13DUF778891751.30E-19
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K20726TMEM222 MAPK signaling pathway - plant map04016

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf46.263
SRR3591706second leaf54.350
SRR3591707mature leaf37.392
SRR3591708Shoot apex48.970
SRR3591709Stem34.783
SRR3591710White floral bud26.195
SRR3591711White flower15.841
SRR3591712Green floral bud33.723
SRR3591713Yellow flower17.243
SRP173429 SRR8316895Juvenile bud stage 42.517
SRR8316896Juvenile bud stage 55.999
SRR8316897Juvenile bud stage 31.368
SRR8316894Third green stage 18.262
SRR8316900Third green stage 43.913
SRR8316901Third green stage 46.790
SRR8316898Complete white stage 19.464
SRR8316899Complete white stage 49.513
SRR8316903Complete white stage 29.884
SRR8316902Silver flowering stage8.600
SRR8316904Silver flowering stage14.647
SRR8316905Silver flowering stage6.645
SRR8316906Gold flowering stage 18.041
SRR8316907Gold flowering stage 18.209
SRR8316908Gold flowering stage 13.657
SRP132670SRR6706286Control52.412
SRR6706287Light intensity 50%54.735
SRR6706288Light intensity 20%59.285
CNP0000432CNS0095592Slightly white alabastrum(diploid) 154.801
CNS0095593Slightly white alabastrum(diploid) 258.790
CNS0095594Slightly white alabastrum(diploid) 358.285
CNS0095595Whole white alabastrum(diploid) 250.024
CNS0095596Whole white alabastrum(diploid) 353.222
CNS0095597Whole white alabastrum(diploid) 442.549
CNS0095598Silvery flower (diploied) 140.298
CNS0095599Silvery flower (diploied) 259.034
CNS0095600Silvery flower (diploied) 341.248
CNS0095601Golden flower (diploid) 152.786
CNS0095602Golden flower (diploid) 237.102
CNS0095603Golden flower (diploid) 339.480
CNS0095604Slightly white alabastrum(tetraploid) 144.356
CNS0095605Slightly white alabastrum(tetraploid) 242.094
CNS0095606Slightly white alabastrum(tetraploid) 356.873
CNS0095607Whole white alabastrum(tetraploid) 134.753
CNS0095608Whole white alabastrum(tetraploid) 229.885
CNS0095609Whole white alabastrum(tetraploid) 344.443
CNS0095610Silvery flower (tetraploid) 131.386
CNS0095611Silvery flower (tetraploid) 232.299
CNS0095612Silvery flower (tetraploid) 320.115
CNS0095613Golden flower (tetraploid) 127.724
CNS0095614Golden flower (tetraploid) 228.009
CNS0095615Golden flower (tetraploid) 321.640
CRA001975CRR073297Stem 168.798
CRR073298Stem 263.167
CRR073299Stem 363.194
CRR073300Leaf 154.214
CRR073301Leaf 268.991
CRR073302Leaf 368.092
CRR073303Juvenile bud 148.867
CRR073304Juvenile bud 246.083
CRR073305Juvenile bud 341.066
CRR073306Third green 114.620
CRR073307Third green 218.987
CRR073308Third green 320.921
CRR073309Second white 112.535
CRR073310Second white 211.812
CRR073311Second white 36.576
CRR073312Silver flowering 17.591
CRR073313Silver flowering 28.038
CRR073314Silver flowering 36.944
CRR073315Gold flowering 136.001
CRR073316Gold flowering 235.759
CRR073317Gold flowering 330.725
CRR073318Tawny withering 160.240
CRR073319Tawny withering 246.328
CRR073320Tawny withering 363.556