Gene detail

Detail information of GWHGAAZE014881

Functional Annotation

Database	Orthologs	Annotation
Nr	XP_009624520.1	PREDICTED: mitogen-activated protein kinase 7-like [Nicotiana tomentosiformis]
Swissprot	tr\|Q39027\|MPK7_ARATH	Mitogen-activated protein kinase 7
trEMBL	tr\|Q9XF95\|Q9XF95_PRUAR	Mitogen-activated protein kinase {ECO:0000256\|RuleBase:RU361165}
TAIR10	AT2G18170.1	MAP kinase 7

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000004	gene	20840222	20842528	+
GWHAAZE00000004	mRNA	20840222	20842528	+
GWHAAZE00000004	exon	20840222	20840662	+
GWHAAZE00000004	exon	20841833	20842528	+
GWHAAZE00000004	CDS	20840222	20840662	+
GWHAAZE00000004	CDS	20841833	20842528	+

Transcript Sequence
>GWHTAAZE014895 ATGGTAATTAGCAGCGGAATGGCAACTCTTGTGGAGCCCCCAAATGGAATTAGGCCACGAGGGAAGCATTATTATACAATGTGGCAAACTTTGTTTGAGATTGATACGAAATATGTACCAATCAAACCGATAGGCAGGGGAGCCTATGGCATAGTGTGTTCTTCGATTGATAGGGAAAAGAATGAGAAAGTTGCAATCAAGAAGATTAACAACGTATTTGGGAATCGGGTTGATGCGTTGAGAACCCTTAGGGAATTGATGCTGCTTCGGCACATCAAGCATGAGAATGTGATTGCTCTCAAGGATGTTATGATGCCCATTTACAGGGCTAGTTTCAAAGATGTATATTTGGTTTATGAGTTGATGGATTCGGATCTTCATCATATTATAAAATCGTCGCAGCCTCTCTCGAACGACCACTGCAAATACTTTTTGTTCCAGTTACTCCGTGGCTTAAAGTATCTTCACTCAGCAAATATTCTTCACCGTGATTTAAAGCCTGGAAACCTCCTCGTCAATGCCAACTGTGAACTCAAAATATGTGATTTCGGACTTGCACGAACGGGCAGAGATAACGGACAGTTCATGACTGAATATGTTGTTACCCGCTGGTATCGTGCACCAGAACTTCTCCTTTGCAGTGACAACTACGGAACCTCGATTGATGTGTGGTCGGTGGGGTGCATCTTTGCTGAAATTCTTGGGCGTAAACCCATATTCCCTGGAACAGAGTGCCTCAACCAACTTAAACTAATAATTGATGTTCTTGGCAGCCAACACGAAGCTGATCTTGAATTTATTGATAATCCCAAGGCCAGGAAGTTCATTAAATCACTTCCCTATTCTAGAGGGACCCGCTTTTCTTCTCTGTACCCCCAGGCCGATCCTTTAGCTTTAGACTTGTTGCAGCGGATGCTTGTGTTTGATCCATCTAAGAGAATCACGGTAACTGAAGCACTCCATCACCCATACATGTTGGGTTTGTATGATCCGAGCCGAAACCCGCCTGCCCAAGTTCCTATCAGTCTCGAGATTGATGAGAATATGGGAGAACCAATGATTAGGGAGATGATGCTGAGGGAAATGCTTTATTATCATCCTGAGGCTGCTTATCTCAACCCATTGGTTATGCACTGA

Network for GWHGAAZE014881

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.26	Pkinase	39	325	4.90E-69

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	CMGC_MAPK

KEGG pathway

KO	Enzyme	pathway	mapID
K20537	MPK7_14	MAPK signaling pathway - plant	map04016

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding
GO:0004707	molecular_function	MAP kinase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	26.624
	SRR3591706	second leaf	11.573
	SRR3591707	mature leaf	9.320
	SRR3591708	Shoot apex	10.514
	SRR3591709	Stem	29.319
	SRR3591710	White floral bud	57.378
	SRR3591711	White flower	127.732
	SRR3591712	Green floral bud	22.262
	SRR3591713	Yellow flower	181.697
SRP173429	SRR8316895	Juvenile bud stage	10.326
	SRR8316896	Juvenile bud stage	15.552
	SRR8316897	Juvenile bud stage	6.834
	SRR8316894	Third green stage	4.895
	SRR8316900	Third green stage	13.590
	SRR8316901	Third green stage	13.000
	SRR8316898	Complete white stage	24.966
	SRR8316899	Complete white stage	23.875
	SRR8316903	Complete white stage	32.669
	SRR8316902	Silver flowering stage	37.113
	SRR8316904	Silver flowering stage	53.388
	SRR8316905	Silver flowering stage	28.393
	SRR8316906	Gold flowering stage	82.380
	SRR8316907	Gold flowering stage	70.514
	SRR8316908	Gold flowering stage	97.240
SRP132670	SRR6706286	Control	14.562
	SRR6706287	Light intensity 50%	17.857
	SRR6706288	Light intensity 20%	14.968
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	12.306
	CNS0095593	Slightly white alabastrum(diploid) 2	10.513
	CNS0095594	Slightly white alabastrum(diploid) 3	11.616
	CNS0095595	Whole white alabastrum(diploid) 2	8.816
	CNS0095596	Whole white alabastrum(diploid) 3	7.522
	CNS0095597	Whole white alabastrum(diploid) 4	7.599
	CNS0095598	Silvery flower (diploied) 1	28.300
	CNS0095599	Silvery flower (diploied) 2	33.854
	CNS0095600	Silvery flower (diploied) 3	124.012
	CNS0095601	Golden flower (diploid) 1	55.575
	CNS0095602	Golden flower (diploid) 2	149.393
	CNS0095603	Golden flower (diploid) 3	147.445
	CNS0095604	Slightly white alabastrum(tetraploid) 1	9.067
	CNS0095605	Slightly white alabastrum(tetraploid) 2	8.643
	CNS0095606	Slightly white alabastrum(tetraploid) 3	12.576
	CNS0095607	Whole white alabastrum(tetraploid) 1	6.200
	CNS0095608	Whole white alabastrum(tetraploid) 2	6.399
	CNS0095609	Whole white alabastrum(tetraploid) 3	11.519
	CNS0095610	Silvery flower (tetraploid) 1	110.867
	CNS0095611	Silvery flower (tetraploid) 2	119.291
	CNS0095612	Silvery flower (tetraploid) 3	146.231
	CNS0095613	Golden flower (tetraploid) 1	119.642
	CNS0095614	Golden flower (tetraploid) 2	124.743
	CNS0095615	Golden flower (tetraploid) 3	219.728
CRA001975	CRR073297	Stem 1	8.882
	CRR073298	Stem 2	8.530
	CRR073299	Stem 3	6.679
	CRR073300	Leaf 1	12.759
	CRR073301	Leaf 2	11.996
	CRR073302	Leaf 3	7.096
	CRR073303	Juvenile bud 1	8.370
	CRR073304	Juvenile bud 2	15.607
	CRR073305	Juvenile bud 3	8.316
	CRR073306	Third green 1	26.423
	CRR073307	Third green 2	24.940
	CRR073308	Third green 3	26.734
	CRR073309	Second white 1	43.591
	CRR073310	Second white 2	48.543
	CRR073311	Second white 3	43.327
	CRR073312	Silver flowering 1	64.625
	CRR073313	Silver flowering 2	63.282
	CRR073314	Silver flowering 3	76.019
	CRR073315	Gold flowering 1	5.082
	CRR073316	Gold flowering 2	6.409
	CRR073317	Gold flowering 3	4.426
	CRR073318	Tawny withering 1	11.142
	CRR073319	Tawny withering 2	16.340
	CRR073320	Tawny withering 3	12.534