Detail information of GWHGAAZE014840


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP34745.10hypothetical protein JCGZ_11271 [Jatropha curcas]
Swissprottr|Q9FL03|SCL4_ARATH0Scarecrow-like protein 4
trEMBLtr|A0A067KR64|A0A067KR64_JATCU0Uncharacterized protein {ECO:0000313|EMBL:KDP34745.1}
TAIR10AT5G66770.10GRAS family transcription factor

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene2009803020099685+
GWHAAZE00000004mRNA2009803020099685+
GWHAAZE00000004exon2009803020099685+
GWHAAZE00000004CDS2009803020099685+
Transcript Sequence

Network for GWHGAAZE014840

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03514.15GRAS1845513.20E-110
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyGRAS

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf38.131
SRR3591706second leaf25.509
SRR3591707mature leaf14.503
SRR3591708Shoot apex37.752
SRR3591709Stem57.826
SRR3591710White floral bud10.562
SRR3591711White flower11.031
SRR3591712Green floral bud35.082
SRR3591713Yellow flower0.718
SRP173429 SRR8316895Juvenile bud stage 23.349
SRR8316896Juvenile bud stage 23.758
SRR8316897Juvenile bud stage 12.299
SRR8316894Third green stage 13.358
SRR8316900Third green stage 41.574
SRR8316901Third green stage 42.375
SRR8316898Complete white stage 3.342
SRR8316899Complete white stage 86.203
SRR8316903Complete white stage 7.101
SRR8316902Silver flowering stage0.276
SRR8316904Silver flowering stage0.891
SRR8316905Silver flowering stage0.103
SRR8316906Gold flowering stage 0.129
SRR8316907Gold flowering stage 0.173
SRR8316908Gold flowering stage 0.241
SRP132670SRR6706286Control47.887
SRR6706287Light intensity 50%44.617
SRR6706288Light intensity 20%48.395
CNP0000432CNS0095592Slightly white alabastrum(diploid) 118.568
CNS0095593Slightly white alabastrum(diploid) 231.476
CNS0095594Slightly white alabastrum(diploid) 322.172
CNS0095595Whole white alabastrum(diploid) 223.832
CNS0095596Whole white alabastrum(diploid) 320.599
CNS0095597Whole white alabastrum(diploid) 422.405
CNS0095598Silvery flower (diploied) 121.427
CNS0095599Silvery flower (diploied) 221.954
CNS0095600Silvery flower (diploied) 39.074
CNS0095601Golden flower (diploid) 114.936
CNS0095602Golden flower (diploid) 214.209
CNS0095603Golden flower (diploid) 315.715
CNS0095604Slightly white alabastrum(tetraploid) 124.292
CNS0095605Slightly white alabastrum(tetraploid) 214.943
CNS0095606Slightly white alabastrum(tetraploid) 373.178
CNS0095607Whole white alabastrum(tetraploid) 115.693
CNS0095608Whole white alabastrum(tetraploid) 210.364
CNS0095609Whole white alabastrum(tetraploid) 334.063
CNS0095610Silvery flower (tetraploid) 11.399
CNS0095611Silvery flower (tetraploid) 23.958
CNS0095612Silvery flower (tetraploid) 32.308
CNS0095613Golden flower (tetraploid) 10.378
CNS0095614Golden flower (tetraploid) 21.672
CNS0095615Golden flower (tetraploid) 30.411
CRA001975CRR073297Stem 136.661
CRR073298Stem 241.405
CRR073299Stem 355.510
CRR073300Leaf 172.699
CRR073301Leaf 273.717
CRR073302Leaf 381.946
CRR073303Juvenile bud 176.732
CRR073304Juvenile bud 245.616
CRR073305Juvenile bud 3117.813
CRR073306Third green 10.469
CRR073307Third green 20.701
CRR073308Third green 32.087
CRR073309Second white 10.376
CRR073310Second white 20.064
CRR073311Second white 30.205
CRR073312Silver flowering 10.289
CRR073313Silver flowering 20.107
CRR073314Silver flowering 30.243
CRR073315Gold flowering 132.936
CRR073316Gold flowering 238.503
CRR073317Gold flowering 346.348
CRR073318Tawny withering 1107.469
CRR073319Tawny withering 254.936
CRR073320Tawny withering 3105.446