Detail information of GWHGAAZE014821


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002273030.18.0148E-141PREDICTED: probable NAD(P)H dehydrogenase (quinone) FQR1-like 2 [Vitis vinifera]
Swissprottr|O23207|FQRL2_ARATH2E-132Probable NAD(P)H dehydrogenase (quinone) FQR1-like 2 {ECO:0000305}
trEMBLtr|F6GWY9|F6GWY9_VITVI3E-141Putative uncharacterized protein {ECO:0000313|EMBL:CCB44475.1}
TAIR10AT4G36750.11E-91Quinone reductase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene1964715319652301-
GWHAAZE00000004mRNA1964715319652301-
GWHAAZE00000004exon1965177219652301-
GWHAAZE00000004exon1964715319647381-
GWHAAZE00000004CDS1965177219652301-
GWHAAZE00000004CDS1964715319647381-
Transcript Sequence

Network for GWHGAAZE014821

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03358.16FMN_red671945.80E-12
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03809wrbA Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Ubiquinone and other terpenoid-quinone biosynthesismap00130

Gene Ontology

GO term OntologyName
GO:0010181molecular_functionFMN binding
GO:0016491molecular_functionoxidoreductase activity
GO:0003955molecular_functionNAD(P)H dehydrogenase (quinone) activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf95.734
SRR3591706second leaf30.962
SRR3591707mature leaf20.950
SRR3591708Shoot apex38.141
SRR3591709Stem89.433
SRR3591710White floral bud33.479
SRR3591711White flower23.733
SRR3591712Green floral bud42.856
SRR3591713Yellow flower18.393
SRP173429 SRR8316895Juvenile bud stage 32.433
SRR8316896Juvenile bud stage 46.184
SRR8316897Juvenile bud stage 22.468
SRR8316894Third green stage 13.778
SRR8316900Third green stage 43.962
SRR8316901Third green stage 45.534
SRR8316898Complete white stage 19.889
SRR8316899Complete white stage 56.153
SRR8316903Complete white stage 25.279
SRR8316902Silver flowering stage13.860
SRR8316904Silver flowering stage15.370
SRR8316905Silver flowering stage12.451
SRR8316906Gold flowering stage 21.770
SRR8316907Gold flowering stage 26.006
SRR8316908Gold flowering stage 22.112
SRP132670SRR6706286Control46.646
SRR6706287Light intensity 50%45.441
SRR6706288Light intensity 20%43.589
CNP0000432CNS0095592Slightly white alabastrum(diploid) 162.280
CNS0095593Slightly white alabastrum(diploid) 264.571
CNS0095594Slightly white alabastrum(diploid) 364.308
CNS0095595Whole white alabastrum(diploid) 245.722
CNS0095596Whole white alabastrum(diploid) 355.340
CNS0095597Whole white alabastrum(diploid) 439.669
CNS0095598Silvery flower (diploied) 125.807
CNS0095599Silvery flower (diploied) 228.985
CNS0095600Silvery flower (diploied) 336.054
CNS0095601Golden flower (diploid) 130.326
CNS0095602Golden flower (diploid) 228.610
CNS0095603Golden flower (diploid) 323.386
CNS0095604Slightly white alabastrum(tetraploid) 164.091
CNS0095605Slightly white alabastrum(tetraploid) 261.490
CNS0095606Slightly white alabastrum(tetraploid) 351.117
CNS0095607Whole white alabastrum(tetraploid) 141.870
CNS0095608Whole white alabastrum(tetraploid) 244.242
CNS0095609Whole white alabastrum(tetraploid) 344.284
CNS0095610Silvery flower (tetraploid) 126.845
CNS0095611Silvery flower (tetraploid) 226.070
CNS0095612Silvery flower (tetraploid) 316.761
CNS0095613Golden flower (tetraploid) 113.072
CNS0095614Golden flower (tetraploid) 219.530
CNS0095615Golden flower (tetraploid) 36.691
CRA001975CRR073297Stem 146.360
CRR073298Stem 241.722
CRR073299Stem 348.012
CRR073300Leaf 142.318
CRR073301Leaf 247.534
CRR073302Leaf 350.772
CRR073303Juvenile bud 147.756
CRR073304Juvenile bud 242.155
CRR073305Juvenile bud 354.030
CRR073306Third green 128.863
CRR073307Third green 238.918
CRR073308Third green 327.589
CRR073309Second white 111.963
CRR073310Second white 27.372
CRR073311Second white 36.101
CRR073312Silver flowering 14.051
CRR073313Silver flowering 26.845
CRR073314Silver flowering 36.307
CRR073315Gold flowering 136.266
CRR073316Gold flowering 240.222
CRR073317Gold flowering 331.261
CRR073318Tawny withering 181.173
CRR073319Tawny withering 250.088
CRR073320Tawny withering 397.439