Detail information of GWHGAAZE014811


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP32938.13.7615E-107hypothetical protein JCGZ_12969 [Jatropha curcas]
Swissprottr|O49997|1433E_TOBAC1E-10414-3-3-like protein E
trEMBLtr|A0A067KD35|A0A067KD35_JATCU1E-107Uncharacterized protein {ECO:0000313|EMBL:KDP32938.1}
TAIR10AT5G38480.22E-81general regulatory factor 3

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene1947673419478945+
GWHAAZE00000004mRNA1947673419478945+
GWHAAZE00000004exon1947673419477219+
GWHAAZE00000004exon1947888319478945+
GWHAAZE00000004CDS1947673419477219+
GWHAAZE00000004CDS1947888319478945+
Transcript Sequence

Network for GWHGAAZE014811

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00244.212014/3/3141734.50E-60
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K06630YWHAE MAPK signaling pathway - yeast map04011
Hippo signaling pathwaymap04390
Hippo signaling pathway - flymap04391
PI3K-Akt signaling pathwaymap04151
Cell cyclemap04110
Oocyte meiosismap04114
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722

Gene Ontology

GO term OntologyName
GO:0019904molecular_functionprotein domain specific binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf266.909
SRR3591706second leaf241.336
SRR3591707mature leaf242.985
SRR3591708Shoot apex214.809
SRR3591709Stem218.020
SRR3591710White floral bud159.140
SRR3591711White flower245.615
SRR3591712Green floral bud201.980
SRR3591713Yellow flower280.107
SRP173429 SRR8316895Juvenile bud stage 143.847
SRR8316896Juvenile bud stage 187.911
SRR8316897Juvenile bud stage 88.047
SRR8316894Third green stage 71.535
SRR8316900Third green stage 179.466
SRR8316901Third green stage 200.687
SRR8316898Complete white stage 68.124
SRR8316899Complete white stage 323.258
SRR8316903Complete white stage 148.025
SRR8316902Silver flowering stage71.590
SRR8316904Silver flowering stage79.551
SRR8316905Silver flowering stage42.768
SRR8316906Gold flowering stage 194.126
SRR8316907Gold flowering stage 160.702
SRR8316908Gold flowering stage 184.431
SRP132670SRR6706286Control285.415
SRR6706287Light intensity 50%281.129
SRR6706288Light intensity 20%308.721
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1208.903
CNS0095593Slightly white alabastrum(diploid) 2210.088
CNS0095594Slightly white alabastrum(diploid) 3167.597
CNS0095595Whole white alabastrum(diploid) 2167.949
CNS0095596Whole white alabastrum(diploid) 3138.500
CNS0095597Whole white alabastrum(diploid) 4160.319
CNS0095598Silvery flower (diploied) 1257.276
CNS0095599Silvery flower (diploied) 2257.878
CNS0095600Silvery flower (diploied) 3296.274
CNS0095601Golden flower (diploid) 1305.364
CNS0095602Golden flower (diploid) 2448.192
CNS0095603Golden flower (diploid) 3440.275
CNS0095604Slightly white alabastrum(tetraploid) 1215.160
CNS0095605Slightly white alabastrum(tetraploid) 2189.018
CNS0095606Slightly white alabastrum(tetraploid) 3403.413
CNS0095607Whole white alabastrum(tetraploid) 1125.740
CNS0095608Whole white alabastrum(tetraploid) 2110.276
CNS0095609Whole white alabastrum(tetraploid) 3232.266
CNS0095610Silvery flower (tetraploid) 1353.740
CNS0095611Silvery flower (tetraploid) 2331.382
CNS0095612Silvery flower (tetraploid) 3214.206
CNS0095613Golden flower (tetraploid) 1347.420
CNS0095614Golden flower (tetraploid) 2442.878
CNS0095615Golden flower (tetraploid) 3318.347
CRA001975CRR073297Stem 1249.393
CRR073298Stem 2244.351
CRR073299Stem 3253.054
CRR073300Leaf 1284.173
CRR073301Leaf 2287.237
CRR073302Leaf 3275.091
CRR073303Juvenile bud 1282.273
CRR073304Juvenile bud 2191.204
CRR073305Juvenile bud 3286.960
CRR073306Third green 151.333
CRR073307Third green 259.002
CRR073308Third green 366.159
CRR073309Second white 1131.126
CRR073310Second white 290.550
CRR073311Second white 355.071
CRR073312Silver flowering 182.057
CRR073313Silver flowering 289.101
CRR073314Silver flowering 390.577
CRR073315Gold flowering 1242.554
CRR073316Gold flowering 2291.430
CRR073317Gold flowering 3252.662
CRR073318Tawny withering 1299.779
CRR073319Tawny withering 2289.186
CRR073320Tawny withering 3247.604