Detail information of GWHGAAZE014763


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009783725.11.9677E-139PREDICTED: zinc finger CCCH domain-containing protein 14 [Nicotiana sylvestris]
Swissprottr|Q9C9N3|C3H14_ARATH1E-72Zinc finger CCCH domain-containing protein 14
trEMBLtr|M1D0E8|M1D0E8_SOLTU2E-132Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400078583}
TAIR10AT1G66810.11E-60Zinc finger C-x8-C-x5-C-x3-H type family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene1833525218336986-
GWHAAZE00000004mRNA1833525218336986-
GWHAAZE00000004exon1833626418336986-
GWHAAZE00000004exon1833525218335554-
GWHAAZE00000004CDS1833626418336986-
GWHAAZE00000004CDS1833525218335554-
Transcript Sequence

Network for GWHGAAZE014763

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00642.25zf-CCCH2672915.00E-12
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC3H

KEGG pathway

KO Enzyme pathway mapID
K18753ZFP36L Cellular senescence map04218

Gene Ontology

GO term OntologyName
GO:0046872molecular_functionmetal ion binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf39.533
SRR3591706second leaf1.940
SRR3591707mature leaf0.110
SRR3591708Shoot apex1.201
SRR3591709Stem14.151
SRR3591710White floral bud0.736
SRR3591711White flower0.064
SRR3591712Green floral bud1.649
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 5.131
SRR8316896Juvenile bud stage 3.192
SRR8316897Juvenile bud stage 0.869
SRR8316894Third green stage 0.896
SRR8316900Third green stage 0.542
SRR8316901Third green stage 0.890
SRR8316898Complete white stage 0.084
SRR8316899Complete white stage 0.615
SRR8316903Complete white stage 0.494
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.034
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.038
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control0.469
SRR6706287Light intensity 50%0.194
SRR6706288Light intensity 20%0.200
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.400
CNS0095593Slightly white alabastrum(diploid) 20.743
CNS0095594Slightly white alabastrum(diploid) 31.928
CNS0095595Whole white alabastrum(diploid) 20.319
CNS0095596Whole white alabastrum(diploid) 30.342
CNS0095597Whole white alabastrum(diploid) 40.565
CNS0095598Silvery flower (diploied) 10.037
CNS0095599Silvery flower (diploied) 20.465
CNS0095600Silvery flower (diploied) 30.199
CNS0095601Golden flower (diploid) 10.000
CNS0095602Golden flower (diploid) 20.286
CNS0095603Golden flower (diploid) 30.230
CNS0095604Slightly white alabastrum(tetraploid) 10.241
CNS0095605Slightly white alabastrum(tetraploid) 20.088
CNS0095606Slightly white alabastrum(tetraploid) 31.639
CNS0095607Whole white alabastrum(tetraploid) 10.062
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 31.005
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.019
CNS0095612Silvery flower (tetraploid) 30.033
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 112.026
CRR073298Stem 25.952
CRR073299Stem 34.330
CRR073300Leaf 11.183
CRR073301Leaf 20.892
CRR073302Leaf 31.205
CRR073303Juvenile bud 10.146
CRR073304Juvenile bud 20.275
CRR073305Juvenile bud 30.171
CRR073306Third green 10.046
CRR073307Third green 20.057
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.013
CRR073311Second white 30.000
CRR073312Silver flowering 10.027
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.218
CRR073317Gold flowering 30.273
CRR073318Tawny withering 112.696
CRR073319Tawny withering 24.601
CRR073320Tawny withering 317.587