Detail information of GWHGAAZE014736


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002274329.20PREDICTED: serine/threonine-protein kinase CDL1 [Vitis vinifera]
Swissprottr|Q5XF57|Y5576_ARATH1E-33Probable receptor-like serine/threonine-protein kinase At5g57670
trEMBLtr|D7TSR1|D7TSR1_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI33533.3}
TAIR10AT5G37790.11E-130Protein kinase superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene1776479717768053-
GWHAAZE00000004mRNA1776479717768053-
GWHAAZE00000004exon1776479717765135-
GWHAAZE00000004exon1776616517766263-
GWHAAZE00000004exon1776668317766903-
GWHAAZE00000004exon1776699917767252-
GWHAAZE00000004exon1776748817768053-
GWHAAZE00000004CDS1776748817768053-
GWHAAZE00000004CDS1776699917767252-
GWHAAZE00000004CDS1776668317766903-
GWHAAZE00000004CDS1776616517766263-
GWHAAZE00000004CDS1776479717765135-
Transcript Sequence

Network for GWHGAAZE014736

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.26Pkinase1903754.50E-25
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_RLCK-VI

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf22.439
SRR3591706second leaf26.418
SRR3591707mature leaf9.648
SRR3591708Shoot apex23.352
SRR3591709Stem23.741
SRR3591710White floral bud17.248
SRR3591711White flower9.536
SRR3591712Green floral bud27.491
SRR3591713Yellow flower3.897
SRP173429 SRR8316895Juvenile bud stage 5.871
SRR8316896Juvenile bud stage 7.839
SRR8316897Juvenile bud stage 3.136
SRR8316894Third green stage 5.416
SRR8316900Third green stage 15.487
SRR8316901Third green stage 13.229
SRR8316898Complete white stage 5.990
SRR8316899Complete white stage 17.709
SRR8316903Complete white stage 8.923
SRR8316902Silver flowering stage3.241
SRR8316904Silver flowering stage7.253
SRR8316905Silver flowering stage2.907
SRR8316906Gold flowering stage 3.761
SRR8316907Gold flowering stage 3.236
SRR8316908Gold flowering stage 4.221
SRP132670SRR6706286Control3.878
SRR6706287Light intensity 50%5.510
SRR6706288Light intensity 20%5.988
CNP0000432CNS0095592Slightly white alabastrum(diploid) 111.151
CNS0095593Slightly white alabastrum(diploid) 210.975
CNS0095594Slightly white alabastrum(diploid) 38.166
CNS0095595Whole white alabastrum(diploid) 211.327
CNS0095596Whole white alabastrum(diploid) 310.497
CNS0095597Whole white alabastrum(diploid) 49.986
CNS0095598Silvery flower (diploied) 110.253
CNS0095599Silvery flower (diploied) 27.421
CNS0095600Silvery flower (diploied) 35.190
CNS0095601Golden flower (diploid) 16.822
CNS0095602Golden flower (diploid) 24.080
CNS0095603Golden flower (diploid) 33.350
CNS0095604Slightly white alabastrum(tetraploid) 117.691
CNS0095605Slightly white alabastrum(tetraploid) 211.784
CNS0095606Slightly white alabastrum(tetraploid) 325.861
CNS0095607Whole white alabastrum(tetraploid) 113.599
CNS0095608Whole white alabastrum(tetraploid) 211.148
CNS0095609Whole white alabastrum(tetraploid) 311.183
CNS0095610Silvery flower (tetraploid) 15.565
CNS0095611Silvery flower (tetraploid) 23.595
CNS0095612Silvery flower (tetraploid) 34.902
CNS0095613Golden flower (tetraploid) 12.830
CNS0095614Golden flower (tetraploid) 22.850
CNS0095615Golden flower (tetraploid) 31.449
CRA001975CRR073297Stem 16.312
CRR073298Stem 26.667
CRR073299Stem 36.256
CRR073300Leaf 18.261
CRR073301Leaf 28.185
CRR073302Leaf 33.681
CRR073303Juvenile bud 15.608
CRR073304Juvenile bud 22.599
CRR073305Juvenile bud 36.239
CRR073306Third green 123.873
CRR073307Third green 218.018
CRR073308Third green 322.477
CRR073309Second white 18.546
CRR073310Second white 24.269
CRR073311Second white 35.083
CRR073312Silver flowering 11.745
CRR073313Silver flowering 22.133
CRR073314Silver flowering 32.360
CRR073315Gold flowering 13.043
CRR073316Gold flowering 22.834
CRR073317Gold flowering 31.721
CRR073318Tawny withering 15.045
CRR073319Tawny withering 23.909
CRR073320Tawny withering 34.933