Gene detail

Detail information of GWHGAAZE014680

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_007047594.1	8.95419E-54	Basic leucine-zipper 5, putative [Theobroma cacao]
Swissprot	tr\|Q9FMC2\|BZP43_ARATH	8E-13	Basic leucine zipper 43
trEMBL	tr\|A0A061DIP8\|A0A061DIP8_THECC	3E-54	Basic leucine-zipper 5, putative {ECO:0000313\|EMBL:EOX91751.1}
TAIR10	AT4G37730.1	3E-18	basic leucine-zipper 7

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000004	gene	16512594	16513382	+
GWHAAZE00000004	mRNA	16512594	16513382	+
GWHAAZE00000004	exon	16512594	16513382	+
GWHAAZE00000004	CDS	16512594	16513382	+

Transcript Sequence
>GWHTAAZE014694 ATGGACCCCCACCCCACCCCCTTCCACTTGCCCATAAATACCACTCCCCTACCACTCCTTTCTTCCCTTTCCCTCTCCAACCTCCCTCCTTATAAAAAAGCTGTTTTCCGGCCAAATGCTGTCCACTTTTCCTTCCCTTCCCTCCTCCGACTTCACCGGAATACCATTTCCGGTATTCGAAGGCGGTTTCATCCTTGGGATTACTATGATGAACCTCCTTTTGTCTCTCAACAAGAAGACCAAATTATTGGTACTCCCCCTAAACAAACACAAAACCCGGCCCTTTTCAATACCGGTTCGAAGAATTCGACCTCAAACCACACCGGTTCAAACTCCGGTTTGGTTCCAACACAAACACAAAAATCGGTCCTTTTCAATTCCGGTTCGGATAACTCGAACTCAAATCACGCCGGTTCAAACTCAGGTTCGGACGAACCGAATAGGTCCGGTTCAGTGACCGACGAGAGAAAGAGGCGGCGGATGATATCGAACCGGGAATCCGCGAGGAGGTCTAGGATGCGGAAACAGAAACACTTGGAGAACCTGAGGAATCAATTGAACCGGCTTAAAATTGGGAACCGGGAACTACTGAACCAGTTACGTTTGGTGACTCATAATTGTCGAATCTTACGTGGAGATAACGACCGGCTCCGGTCGGAGTCGGTTATGCTCACGCAGAAACTGTGGGACATACGTCAAATTTTACTTGTACGGCAAATCCAGCAGCAGCTATCTTGCAATAATTTCACCTGCATCAATGAGCAAATCCCACCCCCATTAATCACATAA

Network for GWHGAAZE014680

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00170.22	bZIP_1	156	213	7.30E-08

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	bZIP

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006355	biological_process	regulation of transcription, DNA-templated
GO:0003700	molecular_function	DNA-binding transcription factor activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	14.312
	SRR3591706	second leaf	1.234
	SRR3591707	mature leaf	3.001
	SRR3591708	Shoot apex	4.914
	SRR3591709	Stem	16.672
	SRR3591710	White floral bud	13.960
	SRR3591711	White flower	12.853
	SRR3591712	Green floral bud	4.970
	SRR3591713	Yellow flower	8.243
SRP173429	SRR8316895	Juvenile bud stage	3.462
	SRR8316896	Juvenile bud stage	2.117
	SRR8316897	Juvenile bud stage	1.001
	SRR8316894	Third green stage	0.991
	SRR8316900	Third green stage	4.614
	SRR8316901	Third green stage	5.635
	SRR8316898	Complete white stage	23.757
	SRR8316899	Complete white stage	22.660
	SRR8316903	Complete white stage	56.916
	SRR8316902	Silver flowering stage	10.507
	SRR8316904	Silver flowering stage	10.001
	SRR8316905	Silver flowering stage	3.950
	SRR8316906	Gold flowering stage	6.580
	SRR8316907	Gold flowering stage	6.733
	SRR8316908	Gold flowering stage	2.787
SRP132670	SRR6706286	Control	10.203
	SRR6706287	Light intensity 50%	11.801
	SRR6706288	Light intensity 20%	8.598
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	1.975
	CNS0095593	Slightly white alabastrum(diploid) 2	1.889
	CNS0095594	Slightly white alabastrum(diploid) 3	1.775
	CNS0095595	Whole white alabastrum(diploid) 2	1.954
	CNS0095596	Whole white alabastrum(diploid) 3	0.871
	CNS0095597	Whole white alabastrum(diploid) 4	1.402
	CNS0095598	Silvery flower (diploied) 1	3.504
	CNS0095599	Silvery flower (diploied) 2	4.815
	CNS0095600	Silvery flower (diploied) 3	13.398
	CNS0095601	Golden flower (diploid) 1	3.555
	CNS0095602	Golden flower (diploid) 2	6.047
	CNS0095603	Golden flower (diploid) 3	5.307
	CNS0095604	Slightly white alabastrum(tetraploid) 1	2.807
	CNS0095605	Slightly white alabastrum(tetraploid) 2	1.629
	CNS0095606	Slightly white alabastrum(tetraploid) 3	5.707
	CNS0095607	Whole white alabastrum(tetraploid) 1	1.505
	CNS0095608	Whole white alabastrum(tetraploid) 2	2.220
	CNS0095609	Whole white alabastrum(tetraploid) 3	2.802
	CNS0095610	Silvery flower (tetraploid) 1	6.909
	CNS0095611	Silvery flower (tetraploid) 2	2.581
	CNS0095612	Silvery flower (tetraploid) 3	2.722
	CNS0095613	Golden flower (tetraploid) 1	3.057
	CNS0095614	Golden flower (tetraploid) 2	1.140
	CNS0095615	Golden flower (tetraploid) 3	3.659
CRA001975	CRR073297	Stem 1	4.554
	CRR073298	Stem 2	4.379
	CRR073299	Stem 3	5.132
	CRR073300	Leaf 1	3.979
	CRR073301	Leaf 2	5.678
	CRR073302	Leaf 3	4.901
	CRR073303	Juvenile bud 1	7.498
	CRR073304	Juvenile bud 2	10.460
	CRR073305	Juvenile bud 3	11.772
	CRR073306	Third green 1	43.776
	CRR073307	Third green 2	46.532
	CRR073308	Third green 3	39.493
	CRR073309	Second white 1	16.577
	CRR073310	Second white 2	11.887
	CRR073311	Second white 3	8.347
	CRR073312	Silver flowering 1	3.031
	CRR073313	Silver flowering 2	1.057
	CRR073314	Silver flowering 3	1.109
	CRR073315	Gold flowering 1	0.276
	CRR073316	Gold flowering 2	0.450
	CRR073317	Gold flowering 3	0.174
	CRR073318	Tawny withering 1	12.137
	CRR073319	Tawny withering 2	13.143
	CRR073320	Tawny withering 3	3.925