Detail information of GWHGAAZE014634


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009782242.10PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.1 [Nicotiana sylvestris]
Swissprottr|O82333|GH31_ARATH0Probable indole-3-acetic acid-amido synthetase GH3.1
trEMBLtr|A0A061DNP2|A0A061DNP2_THECC0Auxin-responsive GH3 family protein {ECO:0000313|EMBL:EOX91583.1}
TAIR10AT2G14960.10Auxin-responsive GH3 family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000004gene1574853115751118+
GWHAAZE00000004mRNA1574853115751118+
GWHAAZE00000004exon1574853115748850+
GWHAAZE00000004exon1574947915749580+
GWHAAZE00000004exon1574974115751118+
GWHAAZE00000004CDS1574853115748850+
GWHAAZE00000004CDS1574947915749580+
GWHAAZE00000004CDS1574974115751118+
Transcript Sequence

Network for GWHGAAZE014634

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03321.14GH3265692.00E-199
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14487GH3 Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.067
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.778
SRR3591709Stem0.000
SRR3591710White floral bud0.074
SRR3591711White flower0.000
SRR3591712Green floral bud12.355
SRR3591713Yellow flower0.079
SRP173429 SRR8316895Juvenile bud stage 0.000
SRR8316896Juvenile bud stage 4.130
SRR8316897Juvenile bud stage 1.040
SRR8316894Third green stage 3.588
SRR8316900Third green stage 11.286
SRR8316901Third green stage 11.449
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.198
SRR8316903Complete white stage 0.057
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.038
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control31.642
SRR6706287Light intensity 50%15.409
SRR6706288Light intensity 20%17.463
CNP0000432CNS0095592Slightly white alabastrum(diploid) 13.276
CNS0095593Slightly white alabastrum(diploid) 20.695
CNS0095594Slightly white alabastrum(diploid) 31.549
CNS0095595Whole white alabastrum(diploid) 21.403
CNS0095596Whole white alabastrum(diploid) 33.182
CNS0095597Whole white alabastrum(diploid) 41.466
CNS0095598Silvery flower (diploied) 10.116
CNS0095599Silvery flower (diploied) 20.000
CNS0095600Silvery flower (diploied) 30.091
CNS0095601Golden flower (diploid) 10.000
CNS0095602Golden flower (diploid) 20.037
CNS0095603Golden flower (diploid) 30.034
CNS0095604Slightly white alabastrum(tetraploid) 10.865
CNS0095605Slightly white alabastrum(tetraploid) 20.716
CNS0095606Slightly white alabastrum(tetraploid) 30.045
CNS0095607Whole white alabastrum(tetraploid) 11.399
CNS0095608Whole white alabastrum(tetraploid) 20.684
CNS0095609Whole white alabastrum(tetraploid) 315.343
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.000
CNS0095612Silvery flower (tetraploid) 30.202
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 11.609
CRR073298Stem 28.444
CRR073299Stem 32.617
CRR073300Leaf 12.690
CRR073301Leaf 25.186
CRR073302Leaf 34.125
CRR073303Juvenile bud 11.688
CRR073304Juvenile bud 21.124
CRR073305Juvenile bud 31.014
CRR073306Third green 10.000
CRR073307Third green 20.034
CRR073308Third green 30.000
CRR073309Second white 10.015
CRR073310Second white 20.000
CRR073311Second white 30.108
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.049
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.037
CRR073319Tawny withering 20.179
CRR073320Tawny withering 30.000